Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 RNU1-78P-201ENST00000391248 165 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 TOMM22P2-201ENST00000430735 237 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 JTBP1-201ENST00000441314 247 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 UQCRBP2-201ENST00000447827 297 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.48□□□□□ -2.17
SSX3Q99909 AC107393.1-201ENST00000512403 346 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 RNU6-264P-201ENST00000517134 104 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 APOOP3-201ENST00000536787 586 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 AC022432.1-201ENST00000595739 310 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 AC113139.1-201ENST00000605049 239 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 MIR1244-1-201ENST00000612829 85 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 AL359075.3-201ENST00000613288 217 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 AL353997.5-201ENST00000618886 171 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.48□□□□□ -2.17
SSX3Q99909 MIR1244-3-201ENST00000635744 85 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 MIR1244-2-201ENST00000636449 85 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 MIR1244-4-202ENST00000636813 85 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 ICE2P2-201ENST00000483823 2787 ntBASIC1.48□□□□□ -2.17
SSX3Q99909 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SSX3Q99909 RNU6-1188P-201ENST00000363795 107 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 RNU6-99P-201ENST00000364721 107 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 SNORD48-201ENST00000364953 64 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 RNU6-1283P-201ENST00000365314 105 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 MIR329-1-201ENST00000385028 80 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 snoU13.27-201ENST00000459278 104 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 AL163195.1-201ENST00000496941 348 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX3Q99909 RNU6-237P-201ENST00000515985 71 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 RNU6-559P-201ENST00000516151 98 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 AC022868.1-201ENST00000517767 391 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX3Q99909 AL137100.2-201ENST00000555786 315 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 FRG2DP-202ENST00000566967 323 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.47□□□□□ -2.17
SSX3Q99909 MIR3618-201ENST00000580330 88 ntBASIC1.47□□□□□ -2.17
SSX3Q99909 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
SSX3Q99909 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SSX3Q99909 RNA5SP361-201ENST00000362686 118 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 RNU6-310P-201ENST00000384655 107 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
SSX3Q99909 RNU6-482P-201ENST00000391068 107 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 RNU6-1186P-201ENST00000410429 97 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 Y_RNA.646-201ENST00000410980 101 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 RNU6-1304P-201ENST00000411374 106 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 COX6CP10-201ENST00000416832 224 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 CYCSP49-201ENST00000420810 319 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.46□□□□□ -2.18
SSX3Q99909 U8.22-201ENST00000459141 133 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 MIR2053-201ENST00000459295 91 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 SNORA25.15-201ENST00000516487 89 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.46□□□□□ -2.18
SSX3Q99909 AC005730.3-201ENST00000583067 366 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 AC104260.1-201ENST00000616660 539 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 AC084768.2-201ENST00000622736 221 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 AC095038.3-201ENST00000634439 195 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.46□□□□□ -2.18
SSX3Q99909 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.45□□□□□ -2.18
SSX3Q99909 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SSX3Q99909 Y_RNA.142-201ENST00000363491 102 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 RNA5SP99-201ENST00000364020 114 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 SNORA16.1-201ENST00000364597 132 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 RNU6-1145P-201ENST00000384246 107 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 Y_RNA.474-201ENST00000384341 102 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 MIR9-3-201ENST00000385084 90 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 SNORA75.6-201ENST00000391318 127 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 AC114482.1-201ENST00000418010 247 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.45□□□□□ -2.18
SSX3Q99909 PCNPP5-201ENST00000452246 481 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 RPS26P55-201ENST00000471178 356 ntBASIC1.45□□□□□ -2.18
SSX3Q99909 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SSX3Q99909 SNORA4.2-201ENST00000365313 147 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 RNU6-1264P-201ENST00000383891 107 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 Y_RNA.577-201ENST00000384794 101 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 MIR625-201ENST00000385047 85 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 RPL30P15-201ENST00000457129 321 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 Y_RNA.653-201ENST00000459091 95 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 SNORD65B-201ENST00000459126 73 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 AC022493.2-201ENST00000506122 481 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 AC074133.1-201ENST00000515696 183 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 RNA5SP445-201ENST00000515889 115 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 RNU6-120P-201ENST00000516077 103 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 RN7SKP49-201ENST00000516675 260 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 AC019176.1-201ENST00000518519 225 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 AC027419.1-201ENST00000522976 328 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 MIR4709-201ENST00000577272 72 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 UBE2V2P2-201ENST00000587677 504 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 RBM11P1-201ENST00000604951 799 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 AL357075.2-201ENST00000614906 189 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 U6.73-201ENST00000619194 103 ntBASIC1.44□□□□□ -2.18
SSX3Q99909 ZNF72P-201ENST00000425869 1908 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 SNORA72.1-201ENST00000363485 129 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 RNU6-890P-201ENST00000384121 107 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 Y_RNA.498-201ENST00000384460 102 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 RNA5SP109-201ENST00000391010 116 ntBASIC1.43□□□□□ -2.18
SSX3Q99909 ELOCP21-201ENST00000412558 336 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms