Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 RN7SKP49-201ENST00000516675 260 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 RNU1-117P-201ENST00000517041 158 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.2□□□□□ -2.06
SIN3AQ96ST3 MIR3126-201ENST00000577443 74 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AC083806.3-201ENST00000614016 455 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AC068205.3-201ENST00000636385 468 ntBASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.2□□□□□ -2.06
SIN3AQ96ST3 AC091812.1-201ENST00000432235 1948 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SIN3AQ96ST3 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 MIR586-201ENST00000385035 97 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 MIR628-201ENST00000385229 95 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SIN3AQ96ST3 MIR300-201ENST00000401138 83 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 MIR1304-201ENST00000408243 91 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 AC123900.1-201ENST00000420390 96 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.19□□□□□ -2.06
SIN3AQ96ST3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.19□□□□□ -2.06
SIN3AQ96ST3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.19□□□□□ -2.06
SIN3AQ96ST3 RNU6-475P-201ENST00000516073 104 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 SNORA40.14-201ENST00000516543 86 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 RNA5SP137-201ENST00000516833 135 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 GNAI2P1-201ENST00000541815 315 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 BX248123.2-201ENST00000606318 124 ntBASIC2.19□□□□□ -2.06
SIN3AQ96ST3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.19□□□□□ -2.06
SIN3AQ96ST3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.18□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 RNU6-438P-201ENST00000365561 103 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 SNORD14D-201ENST00000384390 87 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 MIR320A-201ENST00000385302 82 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.645-201ENST00000391229 102 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 AC010531.2-201ENST00000465012 153 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 SNORA25.10-201ENST00000515926 124 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 RNU6-237P-201ENST00000515985 71 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 RNU6-988P-201ENST00000519081 107 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 AC091144.1-201ENST00000519573 138 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.18□□□□□ -2.06
SIN3AQ96ST3 AC087441.2-201ENST00000529141 262 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 AL031274.2-201ENST00000599419 203 ntBASIC2.18□□□□□ -2.06
SIN3AQ96ST3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.18□□□□□ -2.06
SIN3AQ96ST3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SIN3AQ96ST3 AC005592.1-201ENST00000566527 1640 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.27-201ENST00000362540 103 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 RNU6-1011P-201ENST00000384668 107 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 ELOCP21-201ENST00000412558 336 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 MTCO1P44-201ENST00000441935 243 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 AC010469.2-201ENST00000496412 480 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 MIR3122-201ENST00000577243 73 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 AC026271.5-201ENST00000577873 130 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 MIR4719-201ENST00000585233 84 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 AL138825.1-201ENST00000618587 192 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 U6.92-201ENST00000636464 89 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.17□□□□□ -2.06
SIN3AQ96ST3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
SIN3AQ96ST3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.326-201ENST00000365176 113 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 MIR548B-201ENST00000385247 97 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 MRPL42P3-201ENST00000401492 326 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 SNORD12B-201ENST00000410433 91 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 RNU2-40P-201ENST00000410833 196 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 RNU6-1012P-201ENST00000516606 109 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 AC023442.1-201ENST00000531247 422 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 AP003072.1-201ENST00000531740 145 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.16□□□□□ -2.06
SIN3AQ96ST3 HSBP1P1-201ENST00000555205 166 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.16□□□□□ -2.06
SIN3AQ96ST3 MIR4753-201ENST00000585119 83 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.16□□□□□ -2.06
SIN3AQ96ST3 AL078596.1-201ENST00000624856 447 ntBASIC2.16□□□□□ -2.06
SIN3AQ96ST3 SNORD114-6-201ENST00000364393 72 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 SNORA33.2-201ENST00000365413 134 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 RNU6-418P-201ENST00000384035 107 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 RNU6-975P-201ENST00000384296 105 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 AL356379.1-201ENST00000414105 126 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 MTCO3P19-201ENST00000415864 321 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 AC139712.2-201ENST00000424302 339 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 AL354695.1-201ENST00000427935 228 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.15□□□□□ -2.07
SIN3AQ96ST3 RPL26P26-201ENST00000480251 434 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 SNORA40.9-201ENST00000515895 93 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 AC104695.3-201ENST00000604052 296 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 AC016925.2-201ENST00000605108 242 ntBASIC2.15□□□□□ -2.07
SIN3AQ96ST3 Y_RNA.202-201ENST00000364083 110 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 RNU6-926P-201ENST00000384075 107 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 HMGN2P39-201ENST00000398005 273 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.14□□□□□ -2.07
SIN3AQ96ST3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.14□□□□□ -2.07
SIN3AQ96ST3 UQCRBP2-201ENST00000447827 297 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 AC016717.1-201ENST00000448918 286 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 PCNPP5-201ENST00000452246 481 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 AC093852.1-201ENST00000503587 266 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 CYCSP23-201ENST00000519781 313 ntBASIC2.14□□□□□ -2.07
SIN3AQ96ST3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms