Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 AC103975.1-201ENST00000482506 483 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.94□□□□□ -1.94
CHFRQ96EP1 RNU6-436P-201ENST00000516171 114 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 RNU6-1183P-201ENST00000517054 60 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 AL078604.3-201ENST00000615580 211 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
CHFRQ96EP1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CHFRQ96EP1 ZNF702P-202ENST00000434269 1966 ntBASIC2.94□□□□□ -1.94
CHFRQ96EP1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.93□□□□□ -1.94
CHFRQ96EP1 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CHFRQ96EP1 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHFRQ96EP1 SNORA22-201ENST00000383907 134 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 RNU6-1248P-201ENST00000391096 64 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 RNA5SP89-201ENST00000410300 108 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC099548.1-201ENST00000421443 426 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC063976.3-201ENST00000426849 329 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 SNRPEP9-201ENST00000436794 238 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 GPM6BP3-201ENST00000442797 145 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 SNORD109B-201ENST00000458961 67 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 SNORD109A-201ENST00000459128 67 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 RN7SL75P-201ENST00000461926 281 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHFRQ96EP1 RNA5SP76-201ENST00000516277 87 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 Y_RNA.712-201ENST00000517011 92 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 RNU6-844P-201ENST00000517175 102 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC115990.1-201ENST00000526957 301 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
CHFRQ96EP1 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.93□□□□□ -1.94
CHFRQ96EP1 AL391813.1-201ENST00000603098 260 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC006254.2-201ENST00000603259 279 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AL356157.2-201ENST00000605122 111 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC013791.1-201ENST00000616619 62 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AC024581.2-201ENST00000619986 252 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 AP001340.1-201ENST00000624405 217 ntBASIC2.93□□□□□ -1.94
CHFRQ96EP1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHFRQ96EP1 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CHFRQ96EP1 SNORD56.1-201ENST00000362913 68 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 RNU6-1285P-201ENST00000363480 105 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 Y_RNA.179-201ENST00000363844 90 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 RNU6-1048P-201ENST00000364054 107 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 RNA5SP274-201ENST00000410484 108 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 AC006461.1-201ENST00000412637 326 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 AC009414.1-201ENST00000427200 443 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 SNRPGP7-201ENST00000469016 106 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 AC091179.3-201ENST00000474761 144 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 HSPE1P4-201ENST00000550617 308 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHFRQ96EP1 AC134026.1-201ENST00000623249 2239 ntBASIC2.92□□□□□ -1.94
CHFRQ96EP1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CHFRQ96EP1 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHFRQ96EP1 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNU6-454P-201ENST00000364292 107 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 Y_RNA.251-201ENST00000364551 99 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 Y_RNA.309-201ENST00000365046 111 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNU6-407P-201ENST00000365280 104 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AL512633.1-201ENST00000399931 655 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 U3.40-201ENST00000408706 208 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RN7SKP284-201ENST00000411002 343 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNA5SP344-201ENST00000411081 104 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AC096649.2-201ENST00000416186 393 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AL158823.1-201ENST00000418441 478 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AC092047.1-201ENST00000424997 240 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AL365496.1-201ENST00000426885 215 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNU2-56P-201ENST00000516826 190 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNA5SP54-201ENST00000516951 92 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 RNU2-12P-201ENST00000517216 168 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 CYCSP23-201ENST00000519781 313 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 AC136628.3-201ENST00000521868 290 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 LINC00933-203ENST00000559812 219 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.91□□□□□ -1.94
CHFRQ96EP1 AC012640.5-201ENST00000623897 319 ntBASIC2.91□□□□□ -1.94
CHFRQ96EP1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.91□□□□□ -1.94
CHFRQ96EP1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
CHFRQ96EP1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHFRQ96EP1 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHFRQ96EP1 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
CHFRQ96EP1 Y_RNA.24-201ENST00000362508 103 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 Y_RNA.294-201ENST00000364916 102 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 RNU6-768P-201ENST00000384683 107 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 MIR196B-201ENST00000384852 84 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 MIR544A-201ENST00000384855 91 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 SNORD37.2-201ENST00000391075 66 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CHFRQ96EP1 RN7SKP61-201ENST00000410642 295 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 HMGN2P35-201ENST00000412164 270 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 AC074117.2-201ENST00000417130 397 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 AL714022.1-201ENST00000439897 151 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 AL357134.1-201ENST00000445848 426 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 RN7SKP179-201ENST00000516126 217 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 RN7SKP43-201ENST00000516173 320 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 RNU6-168P-201ENST00000516189 101 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 RNU6-561P-201ENST00000516222 102 ntBASIC2.9□□□□□ -1.95
CHFRQ96EP1 AP001328.1-201ENST00000528550 176 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms