Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 snoU13.25-201ENST00000458945 104 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 RPS29P27-201ENST00000463711 170 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 RPL39P5-202ENST00000512505 151 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 RNU6-1110P-201ENST00000516462 101 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 RNU6-344P-201ENST00000516635 111 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 RNU6-612P-201ENST00000516909 102 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 AC106038.2-201ENST00000520706 568 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC0.2□□□□□ -2.38
TOPBP1Q92547 MTCO3P23-201ENST00000561363 289 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 MIR4703-201ENST00000577728 79 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 AC011195.1-201ENST00000578177 177 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 MIR3682-201ENST00000581338 84 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 FGF7P1-201ENST00000582820 288 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.2□□□□□ -2.38
TOPBP1Q92547 AC004832.4-201ENST00000608952 331 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 AL096861.1-201ENST00000610899 123 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 MIR7844-201ENST00000616161 122 ntBASIC0.2□□□□□ -2.38
TOPBP1Q92547 SNORD113-6-201ENST00000363345 75 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 Y_RNA.399-201ENST00000383955 105 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 RNU6-424P-201ENST00000384367 105 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 MIR1185-2-201ENST00000408687 86 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 RNA5SP222-201ENST00000411039 105 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 CALM2P4-201ENST00000430810 426 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 AC104332.1-201ENST00000440471 797 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 MTCO2P7-201ENST00000446518 666 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 GMFBP1-201ENST00000467831 427 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 RNU7-128P-201ENST00000517247 62 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.19□□□□□ -2.38
TOPBP1Q92547 MTND2P32-201ENST00000521584 1038 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 AC023827.1-201ENST00000569247 97 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 MIR3192-201ENST00000584920 77 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 AC068790.2-201ENST00000602601 557 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 AL391903.3-201ENST00000612158 163 ntBASIC0.19□□□□□ -2.38
TOPBP1Q92547 RNA5SP264-201ENST00000363115 107 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 RNU6-1286P-201ENST00000383871 107 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 SNORA36.2-201ENST00000384004 127 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 RNU6-793P-201ENST00000384233 104 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 SNORD73A-201ENST00000386062 65 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 RN7SKP142-201ENST00000411236 328 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 RNU6-195P-201ENST00000411352 109 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 MTCO1P19-201ENST00000443487 500 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AL009048.1-201ENST00000450437 298 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC091133.4-201ENST00000511142 308 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 SNORA70.12-201ENST00000516084 153 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 SNORD27.1-201ENST00000516319 72 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 MIR4667-201ENST00000578933 66 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 MTND1P15-201ENST00000579262 949 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC131055.1-201ENST00000584626 316 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 SEPT14P17-201ENST00000617978 177 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 MTND5P16-201ENST00000460269 1703 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
TOPBP1Q92547 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 MTND3P9-201ENST00000429526 346 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC093019.1-201ENST00000443135 252 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC105417.1-201ENST00000514691 285 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 RNU1-117P-201ENST00000517041 158 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.18□□□□□ -2.38
TOPBP1Q92547 FRG2DP-202ENST00000566967 323 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 RMST_3.1-201ENST00000611651 109 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AC137590.2-201ENST00000619709 240 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 OR5AK4P-201ENST00000635912 903 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 ZNF204P-201ENST00000416749 2397 ntBASIC0.18□□□□□ -2.38
TOPBP1Q92547 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.17□□□□□ -2.38
TOPBP1Q92547 RNU7-167P-201ENST00000459160 62 ntBASIC0.17□□□□□ -2.38
TOPBP1Q92547 RNU7-28P-201ENST00000516759 62 ntBASIC0.17□□□□□ -2.38
TOPBP1Q92547 AC022868.1-201ENST00000517767 391 ntBASIC0.17□□□□□ -2.38
TOPBP1Q92547 AP003461.1-201ENST00000528866 78 ntBASIC0.17□□□□□ -2.38
TOPBP1Q92547 AP000240.1-201ENST00000609910 452 ntBASIC0.17□□□□□ -2.38
TOPBP1Q92547 AL136317.1-201ENST00000612653 226 ntBASIC0.17□□□□□ -2.38
TOPBP1Q92547 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.17□□□□□ -2.38
TOPBP1Q92547 AL663109.1-201ENST00000411498 844 ntBASIC0.16□□□□□ -2.38
TOPBP1Q92547 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 RPL23AP54-201ENST00000495129 419 ntBASIC0.16□□□□□ -2.38
TOPBP1Q92547 RN7SKP12-201ENST00000516275 143 ntBASIC0.16□□□□□ -2.38
TOPBP1Q92547 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 U2.17-201ENST00000611454 95 ntBASIC0.16□□□□□ -2.38
TOPBP1Q92547 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
TOPBP1Q92547 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
TOPBP1Q92547 MIR103A2-201ENST00000362154 78 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 RNU2-29P-201ENST00000410423 189 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 SSR1P2-201ENST00000415208 787 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 ZNF114P1-201ENST00000453500 292 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 SNORD65B-201ENST00000459126 73 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.15□□□□□ -2.39
TOPBP1Q92547 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.15□□□□□ -2.39
TOPBP1Q92547 RNA5SP54-201ENST00000516951 92 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 MTND1P35-201ENST00000526739 508 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
TOPBP1Q92547 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.15□□□□□ -2.39
TOPBP1Q92547 AC004223.2-201ENST00000590309 544 ntBASIC0.15□□□□□ -2.39
TOPBP1Q92547 AL117336.2-201ENST00000602435 335 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms