Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 HMGB3P3-201ENST00000510526 400 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 RNU6-436P-201ENST00000516171 114 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 RNU6-107P-201ENST00000516643 102 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 MTND5P41-201ENST00000517498 206 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 MIR5692C2-201ENST00000577959 77 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 MIR4635-201ENST00000583759 79 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 SNORD11B-201ENST00000607707 90 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 AC104465.1-201ENST00000611365 139 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 U4.3-201ENST00000621047 82 ntBASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.98□□□□□ -1.93
SHCBP1Q8NEM2 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 AL357139.1-201ENST00000407792 426 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 U3.40-201ENST00000408706 208 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 RNU6-394P-201ENST00000410735 107 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 AC009414.1-201ENST00000427200 443 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 UBL5P3-201ENST00000475112 231 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 RNA5SP320-201ENST00000516263 124 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 RNU6-346P-201ENST00000516288 111 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 MIR3144-201ENST00000579460 79 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 MIR5006-201ENST00000583027 110 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 AC006380.1-201ENST00000603598 186 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 AC068205.3-201ENST00000636385 468 ntBASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.97□□□□□ -1.93
SHCBP1Q8NEM2 ZNF658B-202ENST00000615961 3375 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 snoU2_19.1-201ENST00000362361 80 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 U8.2-201ENST00000363156 134 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 RNY1P5-201ENST00000383890 115 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 MIR767-201ENST00000390228 109 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 SNORA3.2-201ENST00000408221 125 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 RNU6-1135P-201ENST00000411083 103 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 UBBP3-201ENST00000445497 241 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 RNU7-200P-201ENST00000516105 62 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 RNU1-117P-201ENST00000517041 158 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 AC079598.5-201ENST00000547460 117 ntBASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.96□□□□□ -1.94
SHCBP1Q8NEM2 AC069528.2-201ENST00000624849 1991 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 Y_RNA.8-201ENST00000362353 102 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 RNU6-324P-201ENST00000363957 106 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 RNU1-109P-201ENST00000383960 147 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 MIR518C-201ENST00000384822 101 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 SNORA12-201ENST00000391162 147 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 AL135790.2-201ENST00000437701 267 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 Y_RNA.637-201ENST00000459424 114 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 RPL36AP48-201ENST00000485521 314 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 RNU2-44P-201ENST00000516795 194 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 AC008739.2-201ENST00000597006 317 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.95□□□□□ -1.94
SHCBP1Q8NEM2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 SNORD115-30-201ENST00000364117 82 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 Y_RNA.398-201ENST00000383952 99 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 SNORA67.2-201ENST00000384300 149 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 RNU5E-9P-201ENST00000411164 104 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 RN7SKP192-201ENST00000411291 327 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 snoU13.26-201ENST00000459452 105 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 AC140059.1-201ENST00000489238 361 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 SUMO2P18-201ENST00000518873 252 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 uc_338.14-201ENST00000613162 166 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 MIR7843-201ENST00000622274 79 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 AC132825.6-201ENST00000638861 357 ntBASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
SHCBP1Q8NEM2 AL359854.1-201ENST00000614203 1594 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 Y_RNA.571-201ENST00000384753 98 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 MIR592-201ENST00000384959 97 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 RNU6-763P-201ENST00000390865 106 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 TMSB4XP3-201ENST00000445144 114 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 U8.19-201ENST00000459095 133 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 HSPE1P18-201ENST00000517602 280 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 AC009127.3-201ENST00000570531 403 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 UCA1.1-201ENST00000620952 75 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 AC026241.1-201ENST00000517873 2142 ntBASIC2.93□□□□□ -1.94
SHCBP1Q8NEM2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 RNA5SP289-201ENST00000362332 137 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 RNU6-801P-201ENST00000364087 105 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 Y_RNA.441-201ENST00000384123 112 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AL031003.1-201ENST00000404229 172 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 RNU4-53P-201ENST00000410828 140 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AL606753.1-201ENST00000427435 87 ntBASIC2.92□□□□□ -1.94
SHCBP1Q8NEM2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms