Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU6-655P-201ENST00000362858 107 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 U3.9-201ENST00000363823 204 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 SNORD115-30-201ENST00000364117 82 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.262-201ENST00000364641 102 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.329-201ENST00000365209 107 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.361-201ENST00000365515 120 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 SNORA18.2-201ENST00000383865 132 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.441-201ENST00000384123 112 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 RNU5E-9P-201ENST00000411164 104 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 AL441985.1-201ENST00000457727 251 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 Y_RNA.637-201ENST00000459424 114 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 AC003982.1-202ENST00000469928 248 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 RNA5SP282-201ENST00000516355 108 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 SUMO2P18-201ENST00000518873 252 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 AC008873.1-201ENST00000625051 138 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 MIR6733-201ENST00000635723 61 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 AC068205.3-201ENST00000636385 468 ntBASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC44A3Q8N4M1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 SNORD87-201ENST00000364849 89 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-804P-201ENST00000384286 107 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 MTCO2P33-201ENST00000402100 465 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 SNORD88.1-201ENST00000408684 91 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 U3.40-201ENST00000408706 208 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 RNU4-53P-201ENST00000410828 140 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-1135P-201ENST00000411083 103 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 RN7SKP192-201ENST00000411291 327 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 AC027124.2-201ENST00000428249 105 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 RPL39P40-201ENST00000445481 146 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 AC112771.1-201ENST00000463581 102 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 AC091021.1-201ENST00000468051 388 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 MIR3144-201ENST00000579460 79 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 uc_338.14-201ENST00000613162 166 ntBASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SLC44A3Q8N4M1 MIR181B1-201ENST00000385240 110 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AL357139.1-201ENST00000407792 426 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 BTF3P11-201ENST00000426582 477 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 HMGB3P3-201ENST00000510526 400 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AC026241.1-201ENST00000517873 2142 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AC068700.1-201ENST00000565862 3754 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AC069528.2-201ENST00000624849 1991 ntBASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.7□□□□□ -1.98
SLC44A3Q8N4M1 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 AP006437.1-201ENST00000641440 3685 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 MIR27B-201ENST00000385129 97 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 SNORA12-201ENST00000391162 147 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 RNA5SP425-201ENST00000410336 112 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 RNA5SP475-201ENST00000410568 110 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 AC024067.1-201ENST00000426199 223 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 RNA5SP320-201ENST00000516263 124 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 AC108706.1-201ENST00000611053 297 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 AL078604.3-201ENST00000615580 211 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 U4.3-201ENST00000621047 82 ntBASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.69□□□□□ -1.98
SLC44A3Q8N4M1 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 snoU2_19.1-201ENST00000362361 80 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-801P-201ENST00000364087 105 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 Y_RNA.243-201ENST00000364481 109 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 Y_RNA.571-201ENST00000384753 98 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-763P-201ENST00000390865 106 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AL031003.1-201ENST00000404229 172 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 TOMM22P2-201ENST00000430735 237 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RPL23AP58-201ENST00000440453 469 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 TMSB4XP3-201ENST00000445144 114 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AL031183.1-201ENST00000457667 207 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-346P-201ENST00000516288 111 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 RNU6-56P-201ENST00000516986 93 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AC100767.1-201ENST00000528178 123 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 MIR5006-201ENST00000583027 110 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AC132825.6-201ENST00000638861 357 ntBASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SLC44A3Q8N4M1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.67□□□□□ -1.98
SLC44A3Q8N4M1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 669.8 ms