Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC010099.1-201ENST00000455434 375 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RNU1-131P-201ENST00000458943 161 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RNU1-61P-201ENST00000516107 151 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RNA5SP179-201ENST00000517284 121 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 YPEL5P3-201ENST00000547227 352 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 MIR4777-201ENST00000583710 86 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 MIR4438-201ENST00000585271 93 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AC087685.1-201ENST00000587507 141 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AC091167.4-201ENST00000605079 184 ntBASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.62□□□□□ -1.83
RNFT1Q5M7Z0 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 SNORA71.3-201ENST00000362582 128 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNA5SP399-201ENST00000364003 117 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-652P-201ENST00000365488 107 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 SNORA18-201ENST00000384416 132 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-1235P-201ENST00000384559 107 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 MIR520G-201ENST00000385064 90 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU2-49P-201ENST00000410666 184 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-733P-201ENST00000410759 104 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 AC016909.1-201ENST00000415916 166 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-498P-201ENST00000459468 107 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RN7SL323P-201ENST00000494712 295 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.705-201ENST00000516862 110 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU7-70P-201ENST00000516941 66 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-1096P-201ENST00000517089 102 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 MIR4668-201ENST00000582284 70 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 MIR548Z-201ENST00000584743 97 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 MIR7702-201ENST00000621931 59 ntBASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
RNFT1Q5M7Z0 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-661P-201ENST00000362409 107 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-363P-201ENST00000362895 105 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 SNORD45B-201ENST00000364617 72 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 SNORA73.2-201ENST00000364946 201 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 RN7SKP156-201ENST00000410308 342 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 RNA5SP39-201ENST00000411245 120 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 AL133547.1-201ENST00000448546 220 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 RN7SKP57-201ENST00000517248 293 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 MIR432-201ENST00000606207 94 ntBASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.6□□□□□ -1.83
RNFT1Q5M7Z0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 MFSD8-236ENST00000641509 4050 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 SNORD115-19-201ENST00000363098 82 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 SNORD115-18-201ENST00000363293 82 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 Y_RNA.155-201ENST00000363632 101 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 SNORD115-17-201ENST00000364612 82 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-409P-201ENST00000384114 104 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 SNORD38C-201ENST00000384381 69 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 U8.11-201ENST00000384699 133 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 RNU6-887P-201ENST00000410660 100 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 U8.18-201ENST00000459285 133 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 PPIAP15-201ENST00000479662 484 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 MIR3618-201ENST00000580330 88 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 AC087741.2-201ENST00000619415 172 ntBASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
RNFT1Q5M7Z0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.84
RNFT1Q5M7Z0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.59□□□□□ -1.84
RNFT1Q5M7Z0 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
RNFT1Q5M7Z0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.59□□□□□ -1.84
RNFT1Q5M7Z0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 SNORD31B-201ENST00000364977 69 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 Y_RNA.607-201ENST00000410597 98 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 AC099677.2-201ENST00000436385 175 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 RNU2-35P-201ENST00000516446 142 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 RNU6-1006P-201ENST00000516998 103 ntBASIC3.58□□□□□ -1.84
RNFT1Q5M7Z0 CYCSP30-201ENST00000546447 172 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms