Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.59□□□□□ -2
CLRN1P58418 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -2
CLRN1P58418 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CLRN1P58418 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CLRN1P58418 AC138915.1-201ENST00000565427 1685 ntBASIC2.58□□□□□ -2
CLRN1P58418 MIR208A-201ENST00000362287 71 ntBASIC2.58□□□□□ -2
CLRN1P58418 SNORD114-7-201ENST00000362520 77 ntBASIC2.58□□□□□ -2
CLRN1P58418 SNORA27.1-201ENST00000362604 124 ntBASIC2.58□□□□□ -2
CLRN1P58418 RNU6-407P-201ENST00000365280 104 ntBASIC2.58□□□□□ -2
CLRN1P58418 MIR561-201ENST00000385216 97 ntBASIC2.58□□□□□ -2
CLRN1P58418 MTCO1P44-201ENST00000441935 243 ntBASIC2.58□□□□□ -2
CLRN1P58418 AL137159.1-201ENST00000452808 512 ntBASIC2.58□□□□□ -2
CLRN1P58418 RNA5SP341-201ENST00000516261 117 ntBASIC2.58□□□□□ -2
CLRN1P58418 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.58□□□□□ -2
CLRN1P58418 MIR8057-201ENST00000620957 69 ntBASIC2.58□□□□□ -2
CLRN1P58418 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.58□□□□□ -2
CLRN1P58418 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CLRN1P58418 AC009487.4-201ENST00000624969 3585 ntBASIC2.57□□□□□ -2
CLRN1P58418 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
CLRN1P58418 AC008264.2-201ENST00000610193 3731 ntBASIC2.57□□□□□ -2
CLRN1P58418 MAPK10-266ENST00000641066 6555 ntBASIC2.57□□□□□ -2
CLRN1P58418 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.57□□□□□ -2
CLRN1P58418 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
CLRN1P58418 RNU1-35P-201ENST00000362782 153 ntBASIC2.57□□□□□ -2
CLRN1P58418 Y_RNA.332-201ENST00000365271 113 ntBASIC2.57□□□□□ -2
CLRN1P58418 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
CLRN1P58418 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
CLRN1P58418 MIR512-1-201ENST00000384913 84 ntBASIC2.57□□□□□ -2
CLRN1P58418 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.57□□□□□ -2
CLRN1P58418 SNORA40.19-201ENST00000390846 128 ntBASIC2.57□□□□□ -2
CLRN1P58418 RN7SKP123-201ENST00000410732 291 ntBASIC2.57□□□□□ -2
CLRN1P58418 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.57□□□□□ -2
CLRN1P58418 AL451074.5-201ENST00000415894 435 ntBASIC2.57□□□□□ -2
CLRN1P58418 AC016909.1-201ENST00000415916 166 ntBASIC2.57□□□□□ -2
CLRN1P58418 AC123900.1-201ENST00000420390 96 ntBASIC2.57□□□□□ -2
CLRN1P58418 RNU7-141P-201ENST00000459304 62 ntBASIC2.57□□□□□ -2
CLRN1P58418 AC018868.1-201ENST00000491307 315 ntBASIC2.57□□□□□ -2
CLRN1P58418 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.57□□□□□ -2
CLRN1P58418 Y_RNA.662-201ENST00000516028 97 ntBASIC2.57□□□□□ -2
CLRN1P58418 RNU6-1337P-201ENST00000516525 95 ntBASIC2.57□□□□□ -2
CLRN1P58418 RNU6-667P-201ENST00000517186 102 ntBASIC2.57□□□□□ -2
CLRN1P58418 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.57□□□□□ -2
CLRN1P58418 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CLRN1P58418 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
CLRN1P58418 RNU6-271P-201ENST00000363858 105 ntBASIC2.56□□□□□ -2
CLRN1P58418 RNU6-899P-201ENST00000363947 107 ntBASIC2.56□□□□□ -2
CLRN1P58418 RNU4-10P-201ENST00000364383 140 ntBASIC2.56□□□□□ -2
CLRN1P58418 Y_RNA.293-201ENST00000364908 93 ntBASIC2.56□□□□□ -2
CLRN1P58418 RNU6-1240P-201ENST00000365155 104 ntBASIC2.56□□□□□ -2
CLRN1P58418 Y_RNA.435-201ENST00000384095 112 ntBASIC2.56□□□□□ -2
CLRN1P58418 Y_RNA.464-201ENST00000384282 110 ntBASIC2.56□□□□□ -2
CLRN1P58418 MIR627-201ENST00000384979 97 ntBASIC2.56□□□□□ -2
CLRN1P58418 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.56□□□□□ -2
CLRN1P58418 AC008134.1-201ENST00000420943 193 ntBASIC2.56□□□□□ -2
CLRN1P58418 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
CLRN1P58418 RPS20P10-201ENST00000451209 253 ntBASIC2.56□□□□□ -2
CLRN1P58418 RPS26P55-201ENST00000471178 356 ntBASIC2.56□□□□□ -2
CLRN1P58418 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.56□□□□□ -2
CLRN1P58418 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.56□□□□□ -2
CLRN1P58418 RNA5SP20-201ENST00000515976 84 ntBASIC2.56□□□□□ -2
CLRN1P58418 RNU6-1219P-201ENST00000516143 112 ntBASIC2.56□□□□□ -2
CLRN1P58418 RNU2-34P-201ENST00000516534 121 ntBASIC2.56□□□□□ -2
CLRN1P58418 RN7SKP57-201ENST00000517248 293 ntBASIC2.56□□□□□ -2
CLRN1P58418 SUMO2P18-201ENST00000518873 252 ntBASIC2.56□□□□□ -2
CLRN1P58418 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.56□□□□□ -2
CLRN1P58418 AC100767.1-201ENST00000528178 123 ntBASIC2.56□□□□□ -2
CLRN1P58418 AC007536.1-201ENST00000533382 349 ntBASIC2.56□□□□□ -2
CLRN1P58418 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.56□□□□□ -2
CLRN1P58418 AL161756.2-201ENST00000604597 246 ntBASIC2.56□□□□□ -2
CLRN1P58418 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.56□□□□□ -2
CLRN1P58418 AC091953.5-201ENST00000622919 233 ntBASIC2.56□□□□□ -2
CLRN1P58418 U6.106-201ENST00000636360 105 ntBASIC2.56□□□□□ -2
CLRN1P58418 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.56□□□□□ -2
CLRN1P58418 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.56□□□□□ -2
CLRN1P58418 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLRN1P58418 AL159152.1-201ENST00000635019 2587 ntBASIC2.55□□□□□ -2
CLRN1P58418 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLRN1P58418 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.55□□□□□ -2
CLRN1P58418 SNORD116-13-201ENST00000384408 92 ntBASIC2.55□□□□□ -2
CLRN1P58418 MIR592-201ENST00000384959 97 ntBASIC2.55□□□□□ -2
CLRN1P58418 MIR548M-201ENST00000408260 86 ntBASIC2.55□□□□□ -2
CLRN1P58418 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.55□□□□□ -2
CLRN1P58418 HSPE1P21-201ENST00000438283 308 ntBASIC2.55□□□□□ -2
CLRN1P58418 AL357134.1-201ENST00000445848 426 ntBASIC2.55□□□□□ -2
CLRN1P58418 HSPE1P13-201ENST00000451143 297 ntBASIC2.55□□□□□ -2
CLRN1P58418 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLRN1P58418 AL137100.2-201ENST00000555786 315 ntBASIC2.55□□□□□ -2
CLRN1P58418 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
CLRN1P58418 AC096644.4-201ENST00000563417 2912 ntBASIC2.55□□□□□ -2
CLRN1P58418 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.54□□□□□ -2
CLRN1P58418 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CLRN1P58418 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
CLRN1P58418 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.54□□□□□ -2
CLRN1P58418 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC2.54□□□□□ -2
CLRN1P58418 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
CLRN1P58418 AL356292.1-201ENST00000283110 373 ntBASIC2.54□□□□□ -2
CLRN1P58418 MIR340-201ENST00000362125 95 ntBASIC2.54□□□□□ -2
CLRN1P58418 Y_RNA.240-201ENST00000364469 95 ntBASIC2.54□□□□□ -2
CLRN1P58418 SNORA25B-201ENST00000365507 128 ntBASIC2.54□□□□□ -2
CLRN1P58418 RNU4-17P-201ENST00000365598 141 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 276.6 ms