Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC110079.1-202ENST00000635213 138 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 MAPK10-266ENST00000641066 6555 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
FOXG1P55316 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
FOXG1P55316 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.38□□□□□ -2.03
FOXG1P55316 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
FOXG1P55316 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXG1P55316 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
FOXG1P55316 VTRNA1-1-201ENST00000363120 99 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 RNU6-529P-201ENST00000363383 104 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 Y_RNA.218-201ENST00000364218 104 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 Y_RNA.293-201ENST00000364908 93 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 RNU6-215P-201ENST00000365169 102 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AC023141.4-201ENST00000412031 328 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 HMGN2P35-201ENST00000412164 270 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.37□□□□□ -2.03
FOXG1P55316 EBAG9P1-201ENST00000418955 543 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.37□□□□□ -2.03
FOXG1P55316 RPL39P40-201ENST00000445481 146 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AL137159.1-201ENST00000452808 512 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 RPL31P41-201ENST00000477967 372 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.37□□□□□ -2.03
FOXG1P55316 SCARNA8-201ENST00000515924 131 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 RNU6-453P-201ENST00000516819 85 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AC136628.3-201ENST00000521868 290 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 MIR3923-201ENST00000579521 83 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 MIR4431-201ENST00000579990 94 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 SNRPGP20-201ENST00000604477 205 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 MIR6852-201ENST00000621699 66 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 SCARNA15.3-201ENST00000626315 122 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 SCARNA4.1-201ENST00000628597 123 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 MIR3199-2-201ENST00000636243 86 ntBASIC2.37□□□□□ -2.03
FOXG1P55316 AC010329.5-201ENST00000623497 2174 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AC108206.1-201ENST00000570186 4159 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
FOXG1P55316 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
FOXG1P55316 MIR26A1-201ENST00000362205 77 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 Y_RNA.24-201ENST00000362508 103 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 Y_RNA.111-201ENST00000363248 100 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 RNU6-487P-201ENST00000365430 104 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 MIR634-201ENST00000385208 97 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 MIR767-201ENST00000390228 109 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 RNU6-750P-201ENST00000390946 107 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AC027124.2-201ENST00000428249 105 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.36□□□□□ -2.03
FOXG1P55316 AL161651.1-201ENST00000440882 223 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AL109933.2-201ENST00000452651 260 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 RNU6-1211P-201ENST00000459179 105 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 RPS27P26-201ENST00000494583 239 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 RNU6-1333P-201ENST00000516162 93 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.36□□□□□ -2.03
FOXG1P55316 AC115990.1-201ENST00000526957 301 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.36□□□□□ -2.03
FOXG1P55316 AL359881.1-201ENST00000602916 267 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AL356575.1-201ENST00000603008 283 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 AC013791.1-201ENST00000616619 62 ntBASIC2.36□□□□□ -2.03
FOXG1P55316 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.36□□□□□ -2.03
FOXG1P55316 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
FOXG1P55316 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
FOXG1P55316 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXG1P55316 Y_RNA.127-201ENST00000363386 109 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 RNU6-1264P-201ENST00000383891 107 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 Y_RNA.542-201ENST00000384641 111 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 MIR626-201ENST00000385032 94 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 MIR513C-201ENST00000401352 84 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 AL031003.1-201ENST00000404229 172 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 AL590004.2-201ENST00000404787 371 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 MIR320B2-201ENST00000408479 138 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 AL513477.1-202ENST00000417061 214 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 RPL30P13-201ENST00000418873 348 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXG1P55316 RN7SKP164-201ENST00000516138 266 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 RNU1-117P-201ENST00000517041 158 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 AC105137.2-201ENST00000569073 466 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 MIR3605-201ENST00000583214 100 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 DNAJC19P2-201ENST00000593340 302 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 AC005520.5-201ENST00000613926 164 ntBASIC2.35□□□□□ -2.03
FOXG1P55316 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
FOXG1P55316 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXG1P55316 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
FOXG1P55316 AC002543.1-201ENST00000299783 1954 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 AC004944.1-201ENST00000517807 3059 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 Y_RNA.40-201ENST00000362645 93 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 RNU6-899P-201ENST00000363947 107 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 SNORD115-30-201ENST00000364117 82 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 SNORD21-201ENST00000383953 95 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 SNORA8.3-201ENST00000384679 139 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 AL035461.1-201ENST00000421490 332 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 AC004386.2-201ENST00000441858 148 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.34□□□□□ -2.03
FOXG1P55316 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.34□□□□□ -2.03
FOXG1P55316 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.34□□□□□ -2.03
FOXG1P55316 SNORA9.3-201ENST00000516383 129 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 AC026241.1-201ENST00000517873 2142 ntBASIC2.34□□□□□ -2.03
FOXG1P55316 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.34□□□□□ -2.03
FOXG1P55316 MIR3136-201ENST00000583498 78 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms