Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 AC097639.2-201ENST00000603159 172 ntBASIC2.72□□□□□ -1.97
HMGA2P52926 AL137843.1-201ENST00000605078 385 ntBASIC2.72□□□□□ -1.97
HMGA2P52926 SNORA51-201ENST00000606420 132 ntBASIC2.72□□□□□ -1.97
HMGA2P52926 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.72□□□□□ -1.97
HMGA2P52926 AC068205.3-201ENST00000636385 468 ntBASIC2.72□□□□□ -1.97
HMGA2P52926 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGA2P52926 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HMGA2P52926 AC108206.1-201ENST00000570186 4159 ntBASIC2.72□□□□□ -1.97
HMGA2P52926 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
HMGA2P52926 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HMGA2P52926 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA2P52926 MIR22-201ENST00000362190 85 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNU6-1134P-201ENST00000365156 101 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 U3.15-201ENST00000365398 212 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNU6-146P-201ENST00000384602 108 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 PTMAP5-201ENST00000393073 333 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 SNORA79-201ENST00000408376 140 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNA5SP129-201ENST00000410276 118 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RN7SKP220-201ENST00000410611 288 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGA2P52926 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA2P52926 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.71□□□□□ -1.98
HMGA2P52926 RPS29P2-201ENST00000479278 136 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNU6-904P-201ENST00000516206 101 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNU6-581P-201ENST00000516214 105 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RNU6-1337P-201ENST00000516525 95 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 SNORA31.20-201ENST00000517111 133 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 AC090897.2-201ENST00000581715 130 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA2P52926 AC006130.2-201ENST00000586202 326 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 U73479.1-201ENST00000618062 168 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 SNORD98-201ENST00000636377 67 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.71□□□□□ -1.98
HMGA2P52926 AL672296.1-201ENST00000427780 2158 ntBASIC2.71□□□□□ -1.98
HMGA2P52926 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA2P52926 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA2P52926 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
HMGA2P52926 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.7□□□□□ -1.98
HMGA2P52926 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGA2P52926 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGA2P52926 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HMGA2P52926 Y_RNA.366-201ENST00000365540 102 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 AL355796.1-201ENST00000406706 323 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 MIR1193-201ENST00000408109 78 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 RNA5SP201-201ENST00000410316 124 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 RNU2-55P-201ENST00000411146 174 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.7□□□□□ -1.98
HMGA2P52926 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGA2P52926 AC091153.1-201ENST00000466297 402 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGA2P52926 HMGB1P22-201ENST00000505315 124 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 RNU6-344P-201ENST00000516635 111 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 AC007751.1-201ENST00000529260 376 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 MIR3921-201ENST00000577308 85 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 MIR5009-201ENST00000578736 100 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGA2P52926 AC012468.1-201ENST00000604888 430 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 SNORD11B-201ENST00000607707 90 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 U6.98-201ENST00000637157 84 ntBASIC2.7□□□□□ -1.98
HMGA2P52926 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
HMGA2P52926 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.7□□□□□ -1.98
HMGA2P52926 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
HMGA2P52926 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC2.7□□□□□ -1.98
HMGA2P52926 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.7□□□□□ -1.98
HMGA2P52926 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGA2P52926 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA2P52926 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.69□□□□□ -1.98
HMGA2P52926 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGA2P52926 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.69□□□□□ -1.98
HMGA2P52926 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU6-173P-201ENST00000364215 104 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 Y_RNA.362-201ENST00000365518 110 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU6-1296P-201ENST00000383879 107 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU1-73P-201ENST00000383971 164 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU6-1113P-201ENST00000384348 107 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNA5SP496-201ENST00000391240 109 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU6-279P-201ENST00000391297 101 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.69□□□□□ -1.98
HMGA2P52926 Y_RNA.625-201ENST00000411256 107 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.69□□□□□ -1.98
HMGA2P52926 AL353689.1-201ENST00000438895 199 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU6-437P-201ENST00000459408 95 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HMGA2P52926 MLLT10P2-201ENST00000506434 249 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU6-1299P-201ENST00000516316 100 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNA5SP367-201ENST00000516557 118 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 RNU4-60P-201ENST00000517239 135 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.69□□□□□ -1.98
HMGA2P52926 AC105137.2-201ENST00000569073 466 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 FTX_3.1-201ENST00000610451 147 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 PCGEM1.1-201ENST00000613431 131 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 Y_RNA.818-201ENST00000618813 71 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 MIR6810-201ENST00000622701 70 ntBASIC2.69□□□□□ -1.98
HMGA2P52926 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
HMGA2P52926 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
HMGA2P52926 AC118273.1-201ENST00000525324 3006 ntBASIC2.68□□□□□ -1.98
HMGA2P52926 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms