Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.15□□□□□ -2.39
COL1A1P02452 AC105417.1-201ENST00000514691 285 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 SNORA70.12-201ENST00000516084 153 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 RN7SKP12-201ENST00000516275 143 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 RNU7-28P-201ENST00000516759 62 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 RNU6-612P-201ENST00000516909 102 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.15□□□□□ -2.39
COL1A1P02452 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.15□□□□□ -2.39
COL1A1P02452 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.15□□□□□ -2.39
COL1A1P02452 AC068790.2-201ENST00000602601 557 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AP000240.1-201ENST00000609910 452 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 7SK.10-201ENST00000621414 298 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 AC007671.2-201ENST00000637344 619 ntBASIC0.15□□□□□ -2.39
COL1A1P02452 SNORD113-6-201ENST00000363345 75 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
COL1A1P02452 RNU6-1286P-201ENST00000383871 107 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 U8.16-201ENST00000391279 133 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 RNU2-29P-201ENST00000410423 189 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AC004866.1-201ENST00000411748 78 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.14□□□□□ -2.39
COL1A1P02452 MTCO1P19-201ENST00000443487 500 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AC093850.1-201ENST00000454121 251 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 OR9P1P-201ENST00000496431 281 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.14□□□□□ -2.39
COL1A1P02452 RNA5SP54-201ENST00000516951 92 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
COL1A1P02452 AP003461.1-201ENST00000528866 78 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AC109810.1-201ENST00000534066 224 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AGGF1P4-201ENST00000568249 801 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 MIR4703-201ENST00000577728 79 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AC234772.3-201ENST00000602277 528 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 AC004832.4-201ENST00000608952 331 ntBASIC0.14□□□□□ -2.39
COL1A1P02452 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
COL1A1P02452 RNA5SP264-201ENST00000363115 107 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 RNU6-424P-201ENST00000384367 105 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 SNORA12.1-201ENST00000390873 148 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 MIR1185-2-201ENST00000408687 86 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC0.13□□□□□ -2.39
COL1A1P02452 AC104332.1-201ENST00000440471 797 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 RPS29P15-201ENST00000458329 171 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 RNU7-167P-201ENST00000459160 62 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 snoU13.11-201ENST00000459219 104 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.13□□□□□ -2.39
COL1A1P02452 AC091133.4-201ENST00000511142 308 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 SNORD27.1-201ENST00000516319 72 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 MTND2P32-201ENST00000521584 1038 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 MRPS36P4-201ENST00000534436 298 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 AC011195.1-201ENST00000578177 177 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 MIR548AX-201ENST00000580117 73 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 U2.17-201ENST00000611454 95 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 AL391903.3-201ENST00000612158 163 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 SEPT14P17-201ENST00000617978 177 ntBASIC0.13□□□□□ -2.39
COL1A1P02452 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.13□□□□□ -2.39
COL1A1P02452 SNORA9.1-201ENST00000362412 131 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 RNU6-1266P-201ENST00000362794 105 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 MIR562-201ENST00000384894 95 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 RNA5SP222-201ENST00000411039 105 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 RN7SKP142-201ENST00000411236 328 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 AC244098.3-201ENST00000424803 96 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.12□□□□□ -2.39
COL1A1P02452 NDUFB4P10-201ENST00000452541 359 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.12□□□□□ -2.39
COL1A1P02452 TPT1P7-201ENST00000458300 517 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 RPS29P27-201ENST00000463711 170 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC0.12□□□□□ -2.39
COL1A1P02452 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC0.12□□□□□ -2.39
COL1A1P02452 RNU6-1198P-201ENST00000516904 67 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 AC022868.1-201ENST00000517767 391 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 MIR4667-201ENST00000578933 66 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 AC131055.1-201ENST00000584626 316 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 AC004223.2-201ENST00000590309 544 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 AC006566.1-201ENST00000608943 513 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 ZNF204P-201ENST00000416749 2397 ntBASIC0.12□□□□□ -2.39
COL1A1P02452 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
COL1A1P02452 SNORA36.2-201ENST00000384004 127 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
COL1A1P02452 SNORD111-201ENST00000408139 94 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.11□□□□□ -2.39
COL1A1P02452 MTND3P9-201ENST00000429526 346 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 CALM2P4-201ENST00000430810 426 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.11□□□□□ -2.39
COL1A1P02452 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.11□□□□□ -2.39
COL1A1P02452 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC0.11□□□□□ -2.39
COL1A1P02452 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.11□□□□□ -2.39
COL1A1P02452 AL009048.1-201ENST00000450437 298 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AL033528.1-201ENST00000453780 140 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 RNU7-138P-201ENST00000459479 64 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 U8.21-201ENST00000459536 136 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 RPL23AP54-201ENST00000495129 419 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 RNA5SP67-201ENST00000516422 131 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 RNU1-117P-201ENST00000517041 158 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 RNU7-128P-201ENST00000517247 62 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 MTND1P35-201ENST00000526739 508 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AL137161.1-201ENST00000532231 390 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.11□□□□□ -2.39
COL1A1P02452 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.11□□□□□ -2.39
COL1A1P02452 RPL21P9-201ENST00000556149 474 ntBASIC0.11□□□□□ -2.39
COL1A1P02452 AC023827.1-201ENST00000569247 97 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms