Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU6-937P-201ENST00000384325 106 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.19□□□□□ -1.9
RAPGEF3O95398 NDUFB4P10-201ENST00000452541 359 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.19□□□□□ -1.9
RAPGEF3O95398 RNU5F-4P-201ENST00000516581 114 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 AC062037.2-201ENST00000610137 73 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
RAPGEF3O95398 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.19□□□□□ -1.9
RAPGEF3O95398 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.18□□□□□ -1.9
RAPGEF3O95398 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RAPGEF3O95398 RNU6-661P-201ENST00000362409 107 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 SNORD81.1-201ENST00000363064 77 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RNY1P10-201ENST00000363268 113 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RNU6-961P-201ENST00000363893 105 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 Y_RNA.396-201ENST00000383949 103 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RNU6-20P-201ENST00000384106 107 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RNU6-220P-201ENST00000390919 107 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 Y_RNA.581-201ENST00000391017 97 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RNA5SP270-201ENST00000411361 118 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 ELOCP21-201ENST00000412558 336 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RPL21P38-201ENST00000418090 167 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 TRBVB-201ENST00000477100 408 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 RPL23AP63-201ENST00000498752 471 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 SNORA48.11-201ENST00000517015 89 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.18□□□□□ -1.9
RAPGEF3O95398 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RAPGEF3O95398 AC005176.2-201ENST00000596933 147 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 SNORD113-5-201ENST00000607261 78 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 AC011373.1-201ENST00000607270 237 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RAPGEF3O95398 Y_RNA.783-201ENST00000613546 102 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 MIR6132-201ENST00000622083 109 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 AC008873.1-201ENST00000625051 138 ntBASIC3.18□□□□□ -1.9
RAPGEF3O95398 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
RAPGEF3O95398 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.17□□□□□ -1.9
RAPGEF3O95398 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RAPGEF3O95398 Y_RNA.84-201ENST00000363011 104 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 Y_RNA.122-201ENST00000363331 96 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 RNU6-234P-201ENST00000365229 104 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.17□□□□□ -1.9
RAPGEF3O95398 RNU6-1264P-201ENST00000383891 107 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 Y_RNA.415-201ENST00000384012 112 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 Y_RNA.570-201ENST00000384750 101 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RAPGEF3O95398 MIR300-201ENST00000401138 83 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 SEPT14P8-201ENST00000508026 178 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.17□□□□□ -1.9
RAPGEF3O95398 RNU6-1098P-201ENST00000516772 96 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 MIR3671-201ENST00000580455 88 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 AL359821.1-201ENST00000605519 182 ntBASIC3.17□□□□□ -1.9
RAPGEF3O95398 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RAPGEF3O95398 SNORD113-8-201ENST00000363497 74 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 SNORA67.2-201ENST00000384300 149 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 MIR586-201ENST00000385035 97 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 MT-TW-201ENST00000387382 68 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 RNU6-1203P-201ENST00000410703 110 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 RAB28P5-201ENST00000427490 651 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 RNA5SP182-201ENST00000516064 82 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 AC022616.8-201ENST00000533569 253 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.16□□□□□ -1.9
RAPGEF3O95398 AC023043.3-201ENST00000593113 385 ntBASIC3.16□□□□□ -1.9
RAPGEF3O95398 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.16□□□□□ -1.9
RAPGEF3O95398 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3.16□□□□□ -1.9
RAPGEF3O95398 snoU2_19.2-201ENST00000363024 80 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 U3.8-201ENST00000363675 217 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 RNU1-51P-201ENST00000365345 176 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 RNU1-109P-201ENST00000383960 147 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 RNU6-546P-201ENST00000383991 107 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 Y_RNA.483-201ENST00000384380 101 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 RNU6-505P-201ENST00000384427 107 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 SNORD88.1-201ENST00000408684 91 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 SNORD13-201ENST00000459299 104 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 AC098869.1-201ENST00000481627 292 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 RNU6-496P-201ENST00000516145 99 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 RNU6-570P-201ENST00000517051 105 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.15□□□□□ -1.91
RAPGEF3O95398 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.15□□□□□ -1.91
RAPGEF3O95398 AC135776.4-201ENST00000624300 1904 ntBASIC3.15□□□□□ -1.91
RAPGEF3O95398 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
RAPGEF3O95398 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RAPGEF3O95398 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
RAPGEF3O95398 MAPK10-266ENST00000641066 6555 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 RNU4-90P-201ENST00000362773 141 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 SNORA72.2-201ENST00000365028 127 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 RNU6ATAC38P-201ENST00000408119 126 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 RNU2-20P-201ENST00000410425 191 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 RNA5SP504-201ENST00000410676 117 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 RPL19P1-201ENST00000411635 428 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.14□□□□□ -1.91
RAPGEF3O95398 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 SNORD127-201ENST00000458892 86 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 RNU7-14P-201ENST00000459331 62 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 TRMT112P2-201ENST00000512910 132 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 MIR3674-201ENST00000636576 68 ntBASIC3.14□□□□□ -1.91
RAPGEF3O95398 MIR335-201ENST00000362173 94 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 SNORA38-201ENST00000363946 132 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 Y_RNA.188-201ENST00000363952 111 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU6-1175P-201ENST00000365200 107 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 RNU6-21P-201ENST00000384710 107 ntBASIC3.13□□□□□ -1.91
RAPGEF3O95398 MIR561-201ENST00000385216 97 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms