Protein–RNA interactions for Protein: O75607

NPM3, Nucleoplasmin-3, humanhuman

Known RBP Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3O75607 SNORD59.2-201ENST00000516873 68 ntBASIC5.58□□□□□ -1.52
NPM3O75607 MIR4277-201ENST00000578298 84 ntBASIC5.58□□□□□ -1.52
NPM3O75607 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC5.58□□□□□ -1.52
NPM3O75607 AL022311.1-201ENST00000623726 19416 ntBASIC5.58□□□□□ -1.52
NPM3O75607 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.58□□□□□ -1.52
NPM3O75607 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.58□□□□□ -1.52
NPM3O75607 AL450345.1-202ENST00000605741 3881 ntBASIC5.58□□□□□ -1.52
NPM3O75607 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
NPM3O75607 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
NPM3O75607 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NPM3O75607 RNA5SP447-201ENST00000363749 119 ntBASIC5.57□□□□□ -1.52
NPM3O75607 SNORA25B-201ENST00000365507 128 ntBASIC5.57□□□□□ -1.52
NPM3O75607 U8.16-201ENST00000391279 133 ntBASIC5.57□□□□□ -1.52
NPM3O75607 RNU6-1086P-201ENST00000410930 100 ntBASIC5.57□□□□□ -1.52
NPM3O75607 CST9LP2-201ENST00000437612 320 ntBASIC5.57□□□□□ -1.52
NPM3O75607 RNU7-12P-201ENST00000516030 62 ntBASIC5.57□□□□□ -1.52
NPM3O75607 FAM106DP-201ENST00000586416 501 ntBASIC5.57□□□□□ -1.52
NPM3O75607 MIR6758-201ENST00000620653 63 ntBASIC5.57□□□□□ -1.52
NPM3O75607 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NPM3O75607 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.57□□□□□ -1.52
NPM3O75607 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NPM3O75607 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
NPM3O75607 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
NPM3O75607 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NPM3O75607 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
NPM3O75607 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 DHX9P1-201ENST00000436565 3076 ntBASIC5.56□□□□□ -1.52
NPM3O75607 RNA5SP493-201ENST00000364115 91 ntBASIC5.56□□□□□ -1.52
NPM3O75607 RNU6-950P-201ENST00000384651 107 ntBASIC5.56□□□□□ -1.52
NPM3O75607 RNU7-48P-201ENST00000458875 63 ntBASIC5.56□□□□□ -1.52
NPM3O75607 SCARNA10-201ENST00000459255 330 ntBASIC5.56□□□□□ -1.52
NPM3O75607 SNRPCP3-201ENST00000474888 476 ntBASIC5.56□□□□□ -1.52
NPM3O75607 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 MUC2-202ENST00000613187 4845 ntBASIC5.56□□□□□ -1.52
NPM3O75607 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPM3O75607 MFSD8-242ENST00000641690 4199 ntBASIC5.56□□□□□ -1.52
NPM3O75607 AL353746.1-201ENST00000566293 6881 ntBASIC5.55□□□□□ -1.52
NPM3O75607 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 SNORA68.1-201ENST00000364537 132 ntBASIC5.55□□□□□ -1.52
NPM3O75607 RNU6-686P-201ENST00000364839 107 ntBASIC5.55□□□□□ -1.52
NPM3O75607 RNU6-1321P-201ENST00000390905 107 ntBASIC5.55□□□□□ -1.52
NPM3O75607 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC5.55□□□□□ -1.52
NPM3O75607 AC087499.7-201ENST00000441958 109 ntBASIC5.55□□□□□ -1.52
NPM3O75607 AC006483.1-201ENST00000487308 313 ntBASIC5.55□□□□□ -1.52
NPM3O75607 MIR3134-201ENST00000579433 74 ntBASIC5.55□□□□□ -1.52
NPM3O75607 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPM3O75607 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPM3O75607 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPM3O75607 AC021146.4-201ENST00000309229 279 ntBASIC5.54□□□□□ -1.52
NPM3O75607 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NPM3O75607 AC110768.1-201ENST00000509222 400 ntBASIC5.54□□□□□ -1.52
NPM3O75607 AC020891.4-201ENST00000605745 93 ntBASIC5.54□□□□□ -1.52
NPM3O75607 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPM3O75607 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
NPM3O75607 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NPM3O75607 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NPM3O75607 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPM3O75607 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPM3O75607 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
NPM3O75607 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPM3O75607 MIRLET7A1-201ENST00000362295 80 ntBASIC5.53□□□□□ -1.52
NPM3O75607 SNORA71.2-201ENST00000364941 134 ntBASIC5.53□□□□□ -1.52
NPM3O75607 SNORA2B-201ENST00000384583 137 ntBASIC5.53□□□□□ -1.52
NPM3O75607 RNU7-79P-201ENST00000516082 62 ntBASIC5.53□□□□□ -1.52
NPM3O75607 PARP1P2-201ENST00000556806 195 ntBASIC5.53□□□□□ -1.52
NPM3O75607 AC012531.5-201ENST00000611375 151 ntBASIC5.53□□□□□ -1.52
NPM3O75607 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NPM3O75607 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NPM3O75607 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.53□□□□□ -1.52
NPM3O75607 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NPM3O75607 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPM3O75607 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
NPM3O75607 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPM3O75607 AC104333.2-201ENST00000422630 192 ntBASIC5.52□□□□□ -1.53
NPM3O75607 AC104619.4-201ENST00000510773 249 ntBASIC5.52□□□□□ -1.53
NPM3O75607 RNA5SP168-201ENST00000516642 112 ntBASIC5.52□□□□□ -1.53
NPM3O75607 YPEL5P3-201ENST00000547227 352 ntBASIC5.52□□□□□ -1.53
NPM3O75607 AP001362.1-201ENST00000625165 124 ntBASIC5.52□□□□□ -1.53
NPM3O75607 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
NPM3O75607 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NPM3O75607 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
NPM3O75607 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NPM3O75607 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NPM3O75607 RNU6-23P-201ENST00000363283 107 ntBASIC5.51□□□□□ -1.53
NPM3O75607 SNORA5.1-201ENST00000384275 131 ntBASIC5.51□□□□□ -1.53
NPM3O75607 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.51□□□□□ -1.53
NPM3O75607 AC015795.1-201ENST00000513669 327 ntBASIC5.51□□□□□ -1.53
NPM3O75607 RNU6-917P-201ENST00000516294 104 ntBASIC5.51□□□□□ -1.53
NPM3O75607 SNORA31.10-201ENST00000516482 106 ntBASIC5.51□□□□□ -1.53
NPM3O75607 RNA5SP230-201ENST00000517039 122 ntBASIC5.51□□□□□ -1.53
NPM3O75607 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms