Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
SMAD9O15198 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.91□□□□□ -2.1
SMAD9O15198 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SMAD9O15198 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
SMAD9O15198 SNORD114-1-201ENST00000362705 72 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 Y_RNA.138-201ENST00000363462 102 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 RNU6-1240P-201ENST00000365155 104 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 RNU6-474P-201ENST00000384243 107 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 SNORA48.1-201ENST00000390879 135 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 AC016909.1-201ENST00000415916 166 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.9□□□□□ -2.11
SMAD9O15198 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 FCF1P4-201ENST00000448326 183 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 RNU6-408P-201ENST00000515910 100 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 RNU6-1146P-201ENST00000516282 102 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.9□□□□□ -2.11
SMAD9O15198 MIR5094-201ENST00000578766 85 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 MIR5188-201ENST00000583467 113 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 SNORD58B-201ENST00000607313 66 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.9□□□□□ -2.11
SMAD9O15198 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMAD9O15198 Y_RNA.128-201ENST00000363391 112 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 RNU1-96P-201ENST00000364163 162 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 MIR764-201ENST00000390811 85 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AL023284.1-201ENST00000403956 276 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 RNA5SP475-201ENST00000410568 110 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 MCFD2P1-201ENST00000417812 300 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 RAB28P5-201ENST00000427490 651 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 MTND4P19-201ENST00000446659 478 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.89□□□□□ -2.11
SMAD9O15198 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.89□□□□□ -2.11
SMAD9O15198 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 SNORA40.14-201ENST00000516543 86 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.89□□□□□ -2.11
SMAD9O15198 MIR4659A-201ENST00000580269 81 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.89□□□□□ -2.11
SMAD9O15198 AC002984.1-201ENST00000591692 448 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 RPS29P30-201ENST00000600975 111 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.89□□□□□ -2.11
SMAD9O15198 U2.15-201ENST00000611544 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.16-201ENST00000613119 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.12-201ENST00000613778 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.20-201ENST00000613956 192 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.89□□□□□ -2.11
SMAD9O15198 U2.9-201ENST00000615427 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AC011476.5-201ENST00000615594 130 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.11-201ENST00000616345 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.2-201ENST00000616535 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.3-201ENST00000617785 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.19-201ENST00000618602 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 RNU2-1-201ENST00000618664 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.6-201ENST00000619225 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.5-201ENST00000619465 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U2.10-201ENST00000620268 191 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 AC134503.1-201ENST00000633048 54 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 U6.92-201ENST00000636464 89 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 MIR3674-201ENST00000636576 68 ntBASIC1.89□□□□□ -2.11
SMAD9O15198 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.89□□□□□ -2.11
SMAD9O15198 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMAD9O15198 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMAD9O15198 snoU2-30.2-201ENST00000362805 70 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 RNA5SP99-201ENST00000364020 114 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 RNU6-417P-201ENST00000384712 107 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 RNU6-482P-201ENST00000391068 107 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 AL079342.1-201ENST00000401460 267 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 PMCHL1-202ENST00000423102 261 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 RNU6-1012P-201ENST00000516606 109 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
SMAD9O15198 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.88□□□□□ -2.11
SMAD9O15198 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.88□□□□□ -2.11
SMAD9O15198 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SMAD9O15198 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.88□□□□□ -2.11
SMAD9O15198 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SMAD9O15198 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SMAD9O15198 SNORA67.3-201ENST00000384366 140 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 SNORA8-201ENST00000384574 139 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 MIR548P-201ENST00000408336 84 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 AC244636.1-201ENST00000421152 228 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 AC099677.2-201ENST00000436385 175 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.87□□□□□ -2.11
SMAD9O15198 AC010469.2-201ENST00000496412 480 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 SNORA25.10-201ENST00000515926 124 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 Y_RNA.701-201ENST00000516812 110 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMAD9O15198 GNAI2P1-201ENST00000541815 315 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.87□□□□□ -2.11
SMAD9O15198 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.87□□□□□ -2.11
SMAD9O15198 MIR5002-201ENST00000584713 97 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 AL353149.1-201ENST00000610667 244 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 MIR338-201ENST00000636369 67 ntBASIC1.87□□□□□ -2.11
SMAD9O15198 AC091812.1-201ENST00000432235 1948 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms