Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.65□□□□□ -2.15
CDX4O14627 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.65□□□□□ -2.15
CDX4O14627 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.65□□□□□ -2.15
CDX4O14627 AC144568.1-201ENST00000520139 137 ntBASIC1.65□□□□□ -2.15
CDX4O14627 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.65□□□□□ -2.15
CDX4O14627 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.65□□□□□ -2.15
CDX4O14627 AC026470.2-201ENST00000561492 181 ntBASIC1.65□□□□□ -2.15
CDX4O14627 MIR5188-201ENST00000583467 113 ntBASIC1.65□□□□□ -2.15
CDX4O14627 AC008737.2-201ENST00000599446 118 ntBASIC1.65□□□□□ -2.15
CDX4O14627 PART1_1.1-201ENST00000611761 217 ntBASIC1.65□□□□□ -2.15
CDX4O14627 RMST_6.1-201ENST00000611980 203 ntBASIC1.65□□□□□ -2.15
CDX4O14627 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CDX4O14627 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CDX4O14627 MTND5P16-201ENST00000460269 1703 ntBASIC1.65□□□□□ -2.15
CDX4O14627 ZNF702P-202ENST00000434269 1966 ntBASIC1.65□□□□□ -2.15
CDX4O14627 Y_RNA.99-201ENST00000363138 105 ntBASIC1.64□□□□□ -2.15
CDX4O14627 RNU1-42P-201ENST00000364033 160 ntBASIC1.64□□□□□ -2.15
CDX4O14627 SNORD115-32-201ENST00000364079 82 ntBASIC1.64□□□□□ -2.15
CDX4O14627 RNU6-743P-201ENST00000364151 106 ntBASIC1.64□□□□□ -2.15
CDX4O14627 RNU6-60P-201ENST00000364792 103 ntBASIC1.64□□□□□ -2.15
CDX4O14627 RNU6-378P-201ENST00000384324 107 ntBASIC1.64□□□□□ -2.15
CDX4O14627 Y_RNA.540-201ENST00000384638 111 ntBASIC1.64□□□□□ -2.15
CDX4O14627 Y_RNA.557-201ENST00000384680 107 ntBASIC1.64□□□□□ -2.15
CDX4O14627 MIR7-2-201ENST00000384970 110 ntBASIC1.64□□□□□ -2.15
CDX4O14627 MIR153-2-201ENST00000385225 87 ntBASIC1.64□□□□□ -2.15
CDX4O14627 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
CDX4O14627 MIR676-201ENST00000390702 67 ntBASIC1.64□□□□□ -2.15
CDX4O14627 snosnR66.1-201ENST00000391095 99 ntBASIC1.64□□□□□ -2.15
CDX4O14627 SNORA12-201ENST00000391162 147 ntBASIC1.64□□□□□ -2.15
CDX4O14627 RNU6-1093P-201ENST00000391194 107 ntBASIC1.64□□□□□ -2.15
CDX4O14627 MIR320B2-201ENST00000408479 138 ntBASIC1.64□□□□□ -2.15
CDX4O14627 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC1.64□□□□□ -2.15
CDX4O14627 AC114482.1-201ENST00000418010 247 ntBASIC1.64□□□□□ -2.15
CDX4O14627 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX4O14627 AP000870.1-201ENST00000472927 406 ntBASIC1.64□□□□□ -2.15
CDX4O14627 AC023442.1-201ENST00000531247 422 ntBASIC1.64□□□□□ -2.15
CDX4O14627 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX4O14627 UBL5P4-201ENST00000562584 236 ntBASIC1.64□□□□□ -2.15
CDX4O14627 AC008749.1-201ENST00000597650 306 ntBASIC1.64□□□□□ -2.15
CDX4O14627 AC005034.5-201ENST00000604219 466 ntBASIC1.64□□□□□ -2.15
CDX4O14627 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.64□□□□□ -2.15
CDX4O14627 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.64□□□□□ -2.15
CDX4O14627 U2.1-201ENST00000618978 145 ntBASIC1.64□□□□□ -2.15
CDX4O14627 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
CDX4O14627 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
CDX4O14627 Y_RNA.389-201ENST00000383924 113 ntBASIC1.63□□□□□ -2.15
CDX4O14627 RNU6-541P-201ENST00000384709 110 ntBASIC1.63□□□□□ -2.15
CDX4O14627 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX4O14627 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
CDX4O14627 AC096920.1-201ENST00000423991 241 ntBASIC1.63□□□□□ -2.15
CDX4O14627 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.63□□□□□ -2.15
CDX4O14627 AC112492.4-201ENST00000456549 352 ntBASIC1.63□□□□□ -2.15
CDX4O14627 AC093259.1-201ENST00000509755 300 ntBASIC1.63□□□□□ -2.15
CDX4O14627 RNU6-1046P-201ENST00000516538 107 ntBASIC1.63□□□□□ -2.15
CDX4O14627 RNU5F-4P-201ENST00000516581 114 ntBASIC1.63□□□□□ -2.15
CDX4O14627 RNU6-58P-201ENST00000517143 103 ntBASIC1.63□□□□□ -2.15
CDX4O14627 AC027288.2-201ENST00000553028 243 ntBASIC1.63□□□□□ -2.15
CDX4O14627 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.63□□□□□ -2.15
CDX4O14627 AC090517.1-201ENST00000569307 266 ntBASIC1.63□□□□□ -2.15
CDX4O14627 SNORD53B-201ENST00000577887 78 ntBASIC1.63□□□□□ -2.15
CDX4O14627 MIR1248-201ENST00000629190 106 ntBASIC1.63□□□□□ -2.15
CDX4O14627 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.63□□□□□ -2.15
CDX4O14627 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
CDX4O14627 Y_RNA.319-201ENST00000365138 92 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-438P-201ENST00000365561 103 ntBASIC1.62□□□□□ -2.15
CDX4O14627 AC117470.1-201ENST00000381974 330 ntBASIC1.62□□□□□ -2.15
CDX4O14627 Y_RNA.424-201ENST00000384063 103 ntBASIC1.62□□□□□ -2.15
CDX4O14627 Y_RNA.459-201ENST00000384251 102 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-1026P-201ENST00000384465 108 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-823P-201ENST00000391042 103 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNA5SP465-201ENST00000391195 109 ntBASIC1.62□□□□□ -2.15
CDX4O14627 AL512604.1-201ENST00000404812 257 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-985P-201ENST00000410182 104 ntBASIC1.62□□□□□ -2.15
CDX4O14627 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.62□□□□□ -2.15
CDX4O14627 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC1.62□□□□□ -2.15
CDX4O14627 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.62□□□□□ -2.15
CDX4O14627 HMGN1P7-201ENST00000491722 313 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RPS23P5-201ENST00000495419 428 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-1045P-201ENST00000516321 107 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-764P-201ENST00000516396 105 ntBASIC1.62□□□□□ -2.15
CDX4O14627 MIR514B-201ENST00000516774 80 ntBASIC1.62□□□□□ -2.15
CDX4O14627 RNU6-1198P-201ENST00000516904 67 ntBASIC1.62□□□□□ -2.15
CDX4O14627 AC022868.1-201ENST00000517767 391 ntBASIC1.62□□□□□ -2.15
CDX4O14627 AC090617.3-201ENST00000573670 475 ntBASIC1.62□□□□□ -2.15
CDX4O14627 MIR4452-201ENST00000583004 71 ntBASIC1.62□□□□□ -2.15
CDX4O14627 MIR4448-201ENST00000584360 86 ntBASIC1.62□□□□□ -2.15
CDX4O14627 VN1R91P-201ENST00000594377 169 ntBASIC1.62□□□□□ -2.15
CDX4O14627 AC016727.2-201ENST00000603988 621 ntBASIC1.62□□□□□ -2.15
CDX4O14627 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
CDX4O14627 CENPCP1-201ENST00000533085 2578 ntBASIC1.62□□□□□ -2.15
CDX4O14627 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CDX4O14627 Y_RNA.145-201ENST00000363527 102 ntBASIC1.61□□□□□ -2.15
CDX4O14627 Y_RNA.191-201ENST00000363972 113 ntBASIC1.61□□□□□ -2.15
CDX4O14627 SNORD14.1-201ENST00000365609 90 ntBASIC1.61□□□□□ -2.15
CDX4O14627 RNU6-160P-201ENST00000384591 107 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MIR518A2-201ENST00000384966 87 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MIR10B-201ENST00000385011 110 ntBASIC1.61□□□□□ -2.15
CDX4O14627 MIR628-201ENST00000385229 95 ntBASIC1.61□□□□□ -2.15
CDX4O14627 RNU2-40P-201ENST00000410833 196 ntBASIC1.61□□□□□ -2.15
CDX4O14627 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms