Protein–RNA interactions for Protein: O00468

AGRN, Agrin, humanhuman

Predictions only

Length 2,067 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AGRNO00468 RNA5SP475-201ENST00000410568 110 ntBASIC1.73□□□□□ -2.13
AGRNO00468 Y_RNA.793-201ENST00000411222 111 ntBASIC1.73□□□□□ -2.13
AGRNO00468 AC012306.1-201ENST00000423267 114 ntBASIC1.73□□□□□ -2.13
AGRNO00468 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.73□□□□□ -2.13
AGRNO00468 MTND2P29-201ENST00000438595 412 ntBASIC1.73□□□□□ -2.13
AGRNO00468 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.73□□□□□ -2.13
AGRNO00468 RPL23AP70-201ENST00000483361 460 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-237P-201ENST00000515985 71 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-436P-201ENST00000516171 114 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-182P-201ENST00000516970 105 ntBASIC1.73□□□□□ -2.13
AGRNO00468 AC005176.2-201ENST00000596933 147 ntBASIC1.73□□□□□ -2.13
AGRNO00468 AL034555.1-201ENST00000604816 211 ntBASIC1.73□□□□□ -2.13
AGRNO00468 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.73□□□□□ -2.13
AGRNO00468 BX322639.1-202ENST00000423987 2213 ntBASIC1.73□□□□□ -2.13
AGRNO00468 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
AGRNO00468 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
AGRNO00468 UBE2WP1-201ENST00000362030 340 ntBASIC1.73□□□□□ -2.13
AGRNO00468 Y_RNA.20-201ENST00000362479 113 ntBASIC1.73□□□□□ -2.13
AGRNO00468 SNORD114-19-201ENST00000363072 75 ntBASIC1.73□□□□□ -2.13
AGRNO00468 Y_RNA.150-201ENST00000363562 102 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-879P-201ENST00000364328 108 ntBASIC1.73□□□□□ -2.13
AGRNO00468 Y_RNA.270-201ENST00000364693 104 ntBASIC1.73□□□□□ -2.13
AGRNO00468 Y_RNA.329-201ENST00000365209 107 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-487P-201ENST00000365430 104 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU4-17P-201ENST00000365598 141 ntBASIC1.73□□□□□ -2.13
AGRNO00468 SNORA18.2-201ENST00000383865 132 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-1083P-201ENST00000384022 107 ntBASIC1.73□□□□□ -2.13
AGRNO00468 MIR627-201ENST00000384979 97 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU4-53P-201ENST00000410828 140 ntBASIC1.73□□□□□ -2.13
AGRNO00468 ELOCP21-201ENST00000412558 336 ntBASIC1.73□□□□□ -2.13
AGRNO00468 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.73□□□□□ -2.13
AGRNO00468 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.73□□□□□ -2.13
AGRNO00468 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.73□□□□□ -2.13
AGRNO00468 RNU5F-4P-201ENST00000516581 114 ntBASIC1.73□□□□□ -2.13
AGRNO00468 RNU6-861P-201ENST00000516745 106 ntBASIC1.73□□□□□ -2.13
AGRNO00468 AC010999.1-201ENST00000611856 324 ntBASIC1.73□□□□□ -2.13
AGRNO00468 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
AGRNO00468 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.72□□□□□ -2.13
AGRNO00468 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
AGRNO00468 HDX-206ENST00000506585 6158 ntTSL 2 BASIC1.72□□□□□ -2.13
AGRNO00468 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
AGRNO00468 RNU6-944P-201ENST00000364023 107 ntBASIC1.72□□□□□ -2.13
AGRNO00468 SNORD87-201ENST00000364849 89 ntBASIC1.72□□□□□ -2.13
AGRNO00468 RNU6-926P-201ENST00000384075 107 ntBASIC1.72□□□□□ -2.13
AGRNO00468 RNU6-843P-201ENST00000384454 104 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AL133475.1-201ENST00000404414 305 ntBASIC1.72□□□□□ -2.13
AGRNO00468 MIR320B2-201ENST00000408479 138 ntBASIC1.72□□□□□ -2.13
AGRNO00468 Y_RNA.597-201ENST00000410463 100 ntBASIC1.72□□□□□ -2.13
AGRNO00468 CYCSP48-201ENST00000417124 323 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AC009414.1-201ENST00000427200 443 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AL356320.1-201ENST00000429616 163 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AC005002.2-201ENST00000438228 269 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.72□□□□□ -2.13
AGRNO00468 snoU13.14-201ENST00000459372 104 ntBASIC1.72□□□□□ -2.13
AGRNO00468 SCARNA11.3-201ENST00000517276 130 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.72□□□□□ -2.13
AGRNO00468 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.72□□□□□ -2.13
AGRNO00468 AC004792.1-201ENST00000614523 137 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.72□□□□□ -2.13
AGRNO00468 MIR7843-201ENST00000622274 79 ntBASIC1.72□□□□□ -2.13
AGRNO00468 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
AGRNO00468 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.72□□□□□ -2.13
AGRNO00468 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.72□□□□□ -2.13
AGRNO00468 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
AGRNO00468 AC026241.1-201ENST00000517873 2142 ntBASIC1.72□□□□□ -2.13
AGRNO00468 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.72□□□□□ -2.13
AGRNO00468 MAPK10-266ENST00000641066 6555 ntBASIC1.71□□□□□ -2.13
AGRNO00468 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
AGRNO00468 Y_RNA.170-201ENST00000363746 110 ntBASIC1.71□□□□□ -2.13
AGRNO00468 SNORD115-30-201ENST00000364117 82 ntBASIC1.71□□□□□ -2.13
AGRNO00468 Y_RNA.562-201ENST00000384695 113 ntBASIC1.71□□□□□ -2.13
AGRNO00468 MIR144-201ENST00000384886 86 ntBASIC1.71□□□□□ -2.13
AGRNO00468 AL390729.2-201ENST00000416137 156 ntBASIC1.71□□□□□ -2.13
AGRNO00468 UQCRBP2-201ENST00000447827 297 ntBASIC1.71□□□□□ -2.13
AGRNO00468 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.71□□□□□ -2.13
AGRNO00468 PRELID3BP1-201ENST00000457142 540 ntBASIC1.71□□□□□ -2.13
AGRNO00468 RPS29P21-201ENST00000496272 170 ntBASIC1.71□□□□□ -2.13
AGRNO00468 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.71□□□□□ -2.13
AGRNO00468 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.71□□□□□ -2.13
AGRNO00468 AC121758.2-201ENST00000553271 193 ntBASIC1.71□□□□□ -2.13
AGRNO00468 AC006001.4-201ENST00000622243 395 ntBASIC1.71□□□□□ -2.13
AGRNO00468 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.13
AGRNO00468 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
AGRNO00468 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.71□□□□□ -2.14
AGRNO00468 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
AGRNO00468 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.71□□□□□ -2.14
AGRNO00468 RNU4-15P-201ENST00000362613 141 ntBASIC1.71□□□□□ -2.14
AGRNO00468 RNU6-1010P-201ENST00000362757 107 ntBASIC1.71□□□□□ -2.14
AGRNO00468 SNORD81.1-201ENST00000363064 77 ntBASIC1.71□□□□□ -2.14
AGRNO00468 RNA5SP138-201ENST00000365098 114 ntBASIC1.71□□□□□ -2.14
AGRNO00468 RN7SKP51-201ENST00000410781 304 ntBASIC1.71□□□□□ -2.14
AGRNO00468 AC027124.2-201ENST00000428249 105 ntBASIC1.71□□□□□ -2.14
AGRNO00468 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.71□□□□□ -2.14
AGRNO00468 SUMO1P3-201ENST00000439961 304 ntBASIC1.71□□□□□ -2.14
AGRNO00468 RPS20P10-201ENST00000451209 253 ntBASIC1.71□□□□□ -2.14
AGRNO00468 Y_RNA.662-201ENST00000516028 97 ntBASIC1.71□□□□□ -2.14
AGRNO00468 RNU2-31P-201ENST00000516954 155 ntBASIC1.71□□□□□ -2.14
AGRNO00468 IGLV3-17-201ENST00000519099 244 ntBASIC1.71□□□□□ -2.14
AGRNO00468 RPL21P9-201ENST00000556149 474 ntBASIC1.71□□□□□ -2.14
AGRNO00468 DEFB122-202ENST00000569013 197 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms