Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AC025754.2-201ENST00000606491 432 ntBASIC3.18□□□□□ -1.9
RFXAPO00287 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.18□□□□□ -1.9
RFXAPO00287 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.18□□□□□ -1.9
RFXAPO00287 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.18□□□□□ -1.9
RFXAPO00287 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RFXAPO00287 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RFXAPO00287 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFXAPO00287 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFXAPO00287 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.17□□□□□ -1.9
RFXAPO00287 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RFXAPO00287 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFXAPO00287 AC022336.2-201ENST00000568966 2538 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 MIR450A1-201ENST00000362262 91 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 Y_RNA.35-201ENST00000362601 101 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 SNORA7.2-201ENST00000364446 145 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 RNU6-487P-201ENST00000365430 104 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 SNORA67.2-201ENST00000384300 149 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 SNORD116-13-201ENST00000384408 92 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 MIR1278-201ENST00000408753 81 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 AC003685.2-201ENST00000422795 395 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.17□□□□□ -1.9
RFXAPO00287 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.17□□□□□ -1.9
RFXAPO00287 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.17□□□□□ -1.9
RFXAPO00287 MIR3923-201ENST00000579521 83 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 MIR5006-201ENST00000583027 110 ntBASIC3.17□□□□□ -1.9
RFXAPO00287 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.17□□□□□ -1.9
RFXAPO00287 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
RFXAPO00287 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.16□□□□□ -1.9
RFXAPO00287 AL353746.1-201ENST00000566293 6881 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFXAPO00287 U3.9-201ENST00000363823 204 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 MIR548B-201ENST00000385247 97 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 RNU6-710P-201ENST00000410424 105 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 RNU4-43P-201ENST00000410628 137 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 snoU13.26-201ENST00000459452 105 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 UBL5P3-201ENST00000475112 231 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 RNU6-344P-201ENST00000516635 111 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 MIR3136-201ENST00000583498 78 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 AC012531.5-201ENST00000611375 151 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 AC068647.2-201ENST00000637380 353 ntBASIC3.16□□□□□ -1.9
RFXAPO00287 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.16□□□□□ -1.9
RFXAPO00287 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RFXAPO00287 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.16□□□□□ -1.9
RFXAPO00287 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.9
RFXAPO00287 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.15□□□□□ -1.9
RFXAPO00287 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
RFXAPO00287 Y_RNA.309-201ENST00000365046 111 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 Y_RNA.584-201ENST00000391090 114 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 SNORA12-201ENST00000391162 147 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 MLLT10P1-201ENST00000418346 262 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 TOMM22P2-201ENST00000430735 237 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 HSPE1P21-201ENST00000438283 308 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 AL161651.1-201ENST00000440882 223 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 MTCO1P44-201ENST00000441935 243 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.15□□□□□ -1.91
RFXAPO00287 SNRPGP8-201ENST00000454064 226 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 RN7SL442P-201ENST00000473804 320 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 AC078918.1-201ENST00000498515 228 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.15□□□□□ -1.91
RFXAPO00287 MIR548AY-201ENST00000617669 107 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 AL590808.1-201ENST00000618696 141 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 snoZ196.1-201ENST00000625269 89 ntBASIC3.15□□□□□ -1.91
RFXAPO00287 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RFXAPO00287 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
RFXAPO00287 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
RFXAPO00287 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFXAPO00287 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
RFXAPO00287 AC008555.8-201ENST00000623602 2168 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.14□□□□□ -1.91
RFXAPO00287 MIR504-201ENST00000385065 83 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 MIR320B2-201ENST00000408479 138 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 RPL23AP62-201ENST00000463396 453 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 AC145146.1-201ENST00000496370 254 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 RNU6-1061P-201ENST00000516530 99 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 TCL6_2.1-201ENST00000615162 119 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 AC007318.2-201ENST00000620999 243 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 U6.98-201ENST00000637157 84 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFXAPO00287 FAM35BP-202ENST00000497389 3337 ntBASIC3.14□□□□□ -1.91
RFXAPO00287 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
RFXAPO00287 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFXAPO00287 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
RFXAPO00287 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
RFXAPO00287 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 SNORA36B-201ENST00000410438 131 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 AC023141.4-201ENST00000412031 328 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 CYCSP48-201ENST00000417124 323 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 AL158147.1-201ENST00000443970 75 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 AL513328.1-201ENST00000446460 224 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 AC010401.1-201ENST00000463867 348 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.13□□□□□ -1.91
RFXAPO00287 RNU6-781P-201ENST00000516377 101 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 RNU7-115P-201ENST00000516433 55 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 RNU2-60P-201ENST00000517290 128 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 AC090142.3-201ENST00000519012 385 ntBASIC3.13□□□□□ -1.91
RFXAPO00287 EIF4A1P12-201ENST00000551910 141 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms