Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
H3BM21 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.88□□□□□ -1.79
H3BM21 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
H3BM21 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
H3BM21 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.88□□□□□ -1.79
H3BM21 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
H3BM21 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
H3BM21 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
H3BM21 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3BM21 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3BM21 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3BM21 USP8P1-201ENST00000494673 3183 ntBASIC3.87□□□□□ -1.79
H3BM21 SNORA31-201ENST00000362607 130 ntBASIC3.87□□□□□ -1.79
H3BM21 Y_RNA.333-201ENST00000365274 102 ntBASIC3.87□□□□□ -1.79
H3BM21 Y_RNA.360-201ENST00000365512 102 ntBASIC3.87□□□□□ -1.79
H3BM21 MIR548A2-201ENST00000384956 97 ntBASIC3.87□□□□□ -1.79
H3BM21 RNU6-750P-201ENST00000390946 107 ntBASIC3.87□□□□□ -1.79
H3BM21 RPL32P35-201ENST00000415214 394 ntBASIC3.87□□□□□ -1.79
H3BM21 AL159169.1-201ENST00000421119 127 ntBASIC3.87□□□□□ -1.79
H3BM21 AL139247.1-201ENST00000422768 325 ntBASIC3.87□□□□□ -1.79
H3BM21 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.87□□□□□ -1.79
H3BM21 AC009238.1-201ENST00000442165 424 ntBASIC3.87□□□□□ -1.79
H3BM21 RPS12P18-201ENST00000442381 270 ntBASIC3.87□□□□□ -1.79
H3BM21 AC009237.6-201ENST00000446969 424 ntBASIC3.87□□□□□ -1.79
H3BM21 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
H3BM21 RNU7-57P-201ENST00000459540 60 ntBASIC3.87□□□□□ -1.79
H3BM21 AC008155.2-201ENST00000464337 397 ntBASIC3.87□□□□□ -1.79
H3BM21 RNU6-693P-201ENST00000516134 107 ntBASIC3.87□□□□□ -1.79
H3BM21 RNU6-1006P-201ENST00000516998 103 ntBASIC3.87□□□□□ -1.79
H3BM21 MIR548BB-201ENST00000626714 66 ntBASIC3.87□□□□□ -1.79
H3BM21 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.87□□□□□ -1.79
H3BM21 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.87□□□□□ -1.79
H3BM21 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
H3BM21 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
H3BM21 SNORD46.1-201ENST00000364139 104 ntBASIC3.86□□□□□ -1.79
H3BM21 SNORA18-201ENST00000384416 132 ntBASIC3.86□□□□□ -1.79
H3BM21 SNORA1.3-201ENST00000384676 136 ntBASIC3.86□□□□□ -1.79
H3BM21 AL133475.1-201ENST00000404414 305 ntBASIC3.86□□□□□ -1.79
H3BM21 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
H3BM21 AC017083.1-201ENST00000428093 483 ntBASIC3.86□□□□□ -1.79
H3BM21 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.86□□□□□ -1.79
H3BM21 GOT2P5-201ENST00000433995 546 ntBASIC3.86□□□□□ -1.79
H3BM21 AC083863.1-201ENST00000438811 231 ntBASIC3.86□□□□□ -1.79
H3BM21 AC114801.3-201ENST00000510231 177 ntBASIC3.86□□□□□ -1.79
H3BM21 Y_RNA.659-201ENST00000515994 113 ntBASIC3.86□□□□□ -1.79
H3BM21 Y_RNA.666-201ENST00000516187 112 ntBASIC3.86□□□□□ -1.79
H3BM21 RNU2-58P-201ENST00000516403 183 ntBASIC3.86□□□□□ -1.79
H3BM21 Y_RNA.705-201ENST00000516862 110 ntBASIC3.86□□□□□ -1.79
H3BM21 AC068657.1-201ENST00000520807 306 ntBASIC3.86□□□□□ -1.79
H3BM21 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.86□□□□□ -1.79
H3BM21 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.86□□□□□ -1.79
H3BM21 AC091304.10-201ENST00000641554 121 ntBASIC3.86□□□□□ -1.79
H3BM21 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
H3BM21 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.86□□□□□ -1.79
H3BM21 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.85□□□□□ -1.79
H3BM21 Y_RNA.155-201ENST00000363632 101 ntBASIC3.85□□□□□ -1.79
H3BM21 Y_RNA.191-201ENST00000363972 113 ntBASIC3.85□□□□□ -1.79
H3BM21 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.85□□□□□ -1.79
H3BM21 SNORD6-201ENST00000365444 73 ntBASIC3.85□□□□□ -1.79
H3BM21 RNU6-409P-201ENST00000384114 104 ntBASIC3.85□□□□□ -1.79
H3BM21 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
H3BM21 RNU6-887P-201ENST00000410660 100 ntBASIC3.85□□□□□ -1.79
H3BM21 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.85□□□□□ -1.79
H3BM21 RPL23AP83-201ENST00000434984 473 ntBASIC3.85□□□□□ -1.79
H3BM21 AL356535.1-201ENST00000440335 398 ntBASIC3.85□□□□□ -1.79
H3BM21 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.85□□□□□ -1.79
H3BM21 HMGN2P7-201ENST00000456186 273 ntBASIC3.85□□□□□ -1.79
H3BM21 snoU13.14-201ENST00000459372 104 ntBASIC3.85□□□□□ -1.79
H3BM21 RNA5SP164-201ENST00000516533 110 ntBASIC3.85□□□□□ -1.79
H3BM21 MIR2114-201ENST00000516645 80 ntBASIC3.85□□□□□ -1.79
H3BM21 RN7SKP282-201ENST00000516824 299 ntBASIC3.85□□□□□ -1.79
H3BM21 AC011604.1-201ENST00000545978 196 ntBASIC3.85□□□□□ -1.79
H3BM21 YPEL5P3-201ENST00000547227 352 ntBASIC3.85□□□□□ -1.79
H3BM21 AC020914.4-201ENST00000597690 277 ntBASIC3.85□□□□□ -1.79
H3BM21 SNORA51-201ENST00000606420 132 ntBASIC3.85□□□□□ -1.79
H3BM21 AL121772.2-201ENST00000614331 297 ntBASIC3.85□□□□□ -1.79
H3BM21 AC012442.3-202ENST00000636742 206 ntBASIC3.85□□□□□ -1.79
H3BM21 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
H3BM21 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3BM21 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
H3BM21 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.85□□□□□ -1.79
H3BM21 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
H3BM21 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
H3BM21 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.84□□□□□ -1.79
H3BM21 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.84□□□□□ -1.79
H3BM21 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
H3BM21 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
H3BM21 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
H3BM21 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3BM21 MIR7-3-201ENST00000384898 110 ntBASIC3.84□□□□□ -1.79
H3BM21 RNU4-69P-201ENST00000410677 143 ntBASIC3.84□□□□□ -1.79
H3BM21 RNU6-733P-201ENST00000410759 104 ntBASIC3.84□□□□□ -1.79
H3BM21 RPS3P1-201ENST00000456781 192 ntBASIC3.84□□□□□ -1.79
H3BM21 AC011602.1-201ENST00000546484 331 ntBASIC3.84□□□□□ -1.79
H3BM21 AC087499.8-201ENST00000578406 226 ntBASIC3.84□□□□□ -1.79
H3BM21 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
H3BM21 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.84□□□□□ -1.8
H3BM21 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.84□□□□□ -1.8
H3BM21 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.8
H3BM21 AC093908.1-201ENST00000623125 8092 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms