Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 RNU6-496P-201ENST00000516145 99 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 AC010297.1-201ENST00000623948 149 ntBASIC2.85□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.179-201ENST00000363844 90 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.257-201ENST00000364596 102 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 SNORA18.2-201ENST00000383865 132 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 SNORD63-201ENST00000384262 68 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.477-201ENST00000384352 108 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 Y_RNA.489-201ENST00000384410 101 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 RNU6-847P-201ENST00000411115 108 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 RPS12P2-201ENST00000439728 269 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 AC004386.2-201ENST00000441858 148 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 AC009237.7-201ENST00000447357 229 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 MTND4LP30-201ENST00000454092 297 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 RPL39P38-201ENST00000467018 153 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 RN7SKP40-201ENST00000517211 242 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 CYCSP23-201ENST00000519781 313 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 AP000942.3-201ENST00000603702 160 ntBASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.84□□□□□ -1.95
NR2E3Q9Y5X4 MTND5P6-201ENST00000422338 1798 ntBASIC2.84□□□□□ -1.96
NR2E3Q9Y5X4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 MIR335-201ENST00000362173 94 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-793P-201ENST00000384233 104 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.466-201ENST00000384294 113 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.539-201ENST00000384635 107 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 AC007395.1-201ENST00000451333 677 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 RPS23P5-201ENST00000495419 428 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.683-201ENST00000516508 93 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-344P-201ENST00000516635 111 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 RNU2-44P-201ENST00000516795 194 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 DEFB131C-201ENST00000528817 165 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 AC055872.1-201ENST00000570978 278 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 MIR5006-201ENST00000583027 110 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 AL355297.2-201ENST00000604792 129 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 AC046143.2-201ENST00000609789 160 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
NR2E3Q9Y5X4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 SNORD113-8-201ENST00000363497 74 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.286-201ENST00000364813 102 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 RNU1-109P-201ENST00000383960 147 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-546P-201ENST00000383991 107 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 AC004866.1-201ENST00000411748 78 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 DEFB108E-201ENST00000524692 240 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 MIR4498-201ENST00000577599 66 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 MZT1P2-201ENST00000604387 248 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 AC127459.3-201ENST00000624328 466 ntBASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
NR2E3Q9Y5X4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 SNORD81.1-201ENST00000363064 77 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 RNA5SP125-201ENST00000364843 120 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.462-201ENST00000384268 102 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 MIR518C-201ENST00000384822 101 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 SNORD58.1-201ENST00000391313 66 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 RNU2-14P-201ENST00000411053 191 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 AC104389.3-201ENST00000445629 235 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 SRIP1-201ENST00000489235 288 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 SNORA40.9-201ENST00000515895 93 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-966P-201ENST00000516479 104 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 RNU5F-4P-201ENST00000516581 114 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 AC022616.8-201ENST00000533569 253 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 SNORD11B-201ENST00000607707 90 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 U6.104-201ENST00000637979 90 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.81□□□□□ -1.96
NR2E3Q9Y5X4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 MTND5P35-201ENST00000557537 1720 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.20-201ENST00000362479 113 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 SNORD56.5-201ENST00000364281 72 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-234P-201ENST00000365229 104 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 Y_RNA.570-201ENST00000384750 101 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 MIR561-201ENST00000385216 97 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 RNU2-32P-201ENST00000411193 191 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 AC096920.1-201ENST00000423991 241 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 AC091179.3-201ENST00000474761 144 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 AC234781.5-201ENST00000508429 271 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 RNA5SP445-201ENST00000515889 115 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 RNU6-111P-201ENST00000517179 105 ntBASIC2.8□□□□□ -1.96
NR2E3Q9Y5X4 AK6P2-201ENST00000549020 471 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms