Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 AL391987.6-201ENST00000305671 199 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-545P-201ENST00000362681 104 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.307-201ENST00000365022 117 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 MIR548B-201ENST00000385247 97 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 SNORA3.2-201ENST00000408221 125 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU4-30P-201ENST00000410245 143 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU2-38P-201ENST00000410856 79 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 AC005042.3-201ENST00000453230 174 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 HMGN2P9-201ENST00000476875 229 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 RNA5SP148-201ENST00000516527 94 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-667P-201ENST00000517186 102 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 AL590240.4-201ENST00000616908 390 ntBASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.81□□□□□ -1.96
PCDHGA2Q9Y5H1 MTND5P6-201ENST00000422338 1798 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.101-201ENST00000363154 102 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.237-201ENST00000364439 102 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.286-201ENST00000364813 102 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.331-201ENST00000365267 102 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 MIR592-201ENST00000384959 97 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU2-54P-201ENST00000410299 190 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU2-48P-201ENST00000410694 191 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 EDDM3CP-201ENST00000415977 425 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU7-26P-201ENST00000458980 63 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 RPL39P38-201ENST00000467018 153 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 AC093259.1-201ENST00000509755 300 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 AC107222.1-201ENST00000510899 637 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 DEFB108E-201ENST00000524692 240 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 AC026271.5-201ENST00000577873 130 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 AL109918.3-201ENST00000603072 338 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 SDR42E1P4-201ENST00000620894 481 ntBASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA2Q9Y5H1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.446-201ENST00000384178 104 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.447-201ENST00000384184 113 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.476-201ENST00000384347 108 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 AC123900.1-201ENST00000420390 96 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 RPS29P6-201ENST00000438196 145 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 AC018868.1-201ENST00000491307 315 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 HMGB3P17-201ENST00000504195 649 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 RNA5SP76-201ENST00000516277 87 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 IGKV3-31-201ENST00000523109 329 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 DEFB122-202ENST00000569013 197 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 AC006001.4-201ENST00000622243 395 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 CTSLP2-204ENST00000629029 392 ntBASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDHGA2Q9Y5H1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.16-201ENST00000362421 102 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-454P-201ENST00000364292 107 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU1-112P-201ENST00000364401 164 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.332-201ENST00000365271 113 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-326P-201ENST00000365480 107 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-975P-201ENST00000384296 105 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 Y_RNA.489-201ENST00000384410 101 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 SNORA53-201ENST00000391141 249 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 MIR1185-2-201ENST00000408687 86 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU6-1199P-201ENST00000411249 104 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AL451074.5-201ENST00000415894 435 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC009963.1-201ENST00000417265 157 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 SUMO1P2-201ENST00000452524 304 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RPS29P21-201ENST00000496272 170 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 SERF1AP1-201ENST00000514575 187 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 RNU2-12P-201ENST00000517216 168 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC012433.1-201ENST00000588916 398 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC008749.1-201ENST00000597650 306 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC006380.1-201ENST00000603598 186 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDHGA2Q9Y5H1 AC108206.1-201ENST00000570186 4159 ntBASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 RNU6-743P-201ENST00000364151 106 ntBASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 Y_RNA.569-201ENST00000384749 103 ntBASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 AL590004.2-201ENST00000404787 371 ntBASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 RPL39P40-201ENST00000445481 146 ntBASIC2.77□□□□□ -1.97
PCDHGA2Q9Y5H1 RNU7-57P-201ENST00000459540 60 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms