Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS4AQ9UN37 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.46□□□□□ -2.02
VPS4AQ9UN37 U4atac.1-201ENST00000618345 95 ntBASIC2.46□□□□□ -2.02
VPS4AQ9UN37 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.46□□□□□ -2.02
VPS4AQ9UN37 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
VPS4AQ9UN37 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 U3.8-201ENST00000363675 217 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 SNORD31B-201ENST00000364977 69 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.376-201ENST00000365638 108 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 RNU6-1264P-201ENST00000383891 107 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 MIR561-201ENST00000385216 97 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 MT-TW-201ENST00000387382 68 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 MIR300-201ENST00000401138 83 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 RPL21P38-201ENST00000418090 167 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 AC016925.1-201ENST00000458303 298 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 RNU7-26P-201ENST00000458980 63 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 RPS29P21-201ENST00000496272 170 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 AC108210.2-201ENST00000503681 201 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 RNU5F-4P-201ENST00000516581 114 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 RNU1-104P-201ENST00000517280 175 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 IGKV3-31-201ENST00000523109 329 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 AC055872.1-201ENST00000570978 278 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 MIR376A1-201ENST00000616574 68 ntBASIC2.45□□□□□ -2.02
VPS4AQ9UN37 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.45□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.396-201ENST00000383949 103 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.498-201ENST00000384460 102 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 Z98742.3-201ENST00000418637 326 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 RPS12P2-201ENST00000439728 269 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 RNU7-14P-201ENST00000459331 62 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 RNU6-625P-201ENST00000459412 107 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.44□□□□□ -2.02
VPS4AQ9UN37 RNU6-496P-201ENST00000516145 99 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS4AQ9UN37 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS4AQ9UN37 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS4AQ9UN37 AL355297.2-201ENST00000604792 129 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 AC127459.3-201ENST00000624328 466 ntBASIC2.44□□□□□ -2.02
VPS4AQ9UN37 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS4AQ9UN37 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.84-201ENST00000363011 104 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 SNORA67.1-201ENST00000364749 141 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 SNORD87-201ENST00000364849 89 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 RNU6-702P-201ENST00000364982 107 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 RNU6-1310P-201ENST00000384153 107 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 SNORA67.4-201ENST00000384688 142 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 MIR215-201ENST00000384858 110 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 MIR548B-201ENST00000385247 97 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 RNU6-482P-201ENST00000391068 107 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 MIR1283-1-201ENST00000408494 87 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 RNU2-20P-201ENST00000410425 191 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 RNU4-53P-201ENST00000410828 140 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 AL390729.2-201ENST00000416137 156 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.676-201ENST00000516393 96 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 NDUFA5P6-201ENST00000542110 379 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 AC015712.3-201ENST00000559380 164 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 AC022441.3-201ENST00000605737 136 ntBASIC2.43□□□□□ -2.02
VPS4AQ9UN37 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS4AQ9UN37 AC009487.4-201ENST00000624969 3585 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 RNU6-545P-201ENST00000362681 104 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 SNORD113-8-201ENST00000363497 74 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.332-201ENST00000365271 113 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 RNU6-713P-201ENST00000384761 107 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 RNU6-1203P-201ENST00000410703 110 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 RNU6-1199P-201ENST00000411249 104 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC007064.1-201ENST00000412238 351 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC139712.2-201ENST00000424302 339 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS4AQ9UN37 HMGN2P18-201ENST00000450680 270 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 HSPE1P25-201ENST00000455484 251 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC093259.1-201ENST00000509755 300 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 RNU6-965P-201ENST00000516721 96 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC023157.2-201ENST00000540596 141 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 MIR4648-201ENST00000580107 72 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 MIR4658-201ENST00000584344 65 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AC005176.2-201ENST00000596933 147 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 MIR6895-201ENST00000613497 78 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 AP001282.2-201ENST00000616149 309 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 MIR3674-201ENST00000636576 68 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.42□□□□□ -2.02
VPS4AQ9UN37 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
VPS4AQ9UN37 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
VPS4AQ9UN37 SNORD81.1-201ENST00000363064 77 ntBASIC2.41□□□□□ -2.02
VPS4AQ9UN37 Y_RNA.101-201ENST00000363154 102 ntBASIC2.41□□□□□ -2.02
VPS4AQ9UN37 RNU6-454P-201ENST00000364292 107 ntBASIC2.41□□□□□ -2.02
VPS4AQ9UN37 RNU6-1175P-201ENST00000365200 107 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms