Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MT-TC-201ENST00000387405 66 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AL512633.1-201ENST00000399931 655 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.630-201ENST00000411370 108 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC138623.1-201ENST00000418060 216 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC092047.1-201ENST00000424997 240 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 CKS1BP5-201ENST00000434172 273 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 RNU6-772P-201ENST00000516042 105 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 MTND5P34-201ENST00000568888 325 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 AC068647.2-201ENST00000637380 353 ntBASIC1.99□□□□□ -2.09
NOTCH3Q9UM47 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.35-201ENST00000362601 101 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 RNU6-968P-201ENST00000384076 107 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 MIR592-201ENST00000384959 97 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 MIR487A-201ENST00000385009 80 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 AL138785.1-201ENST00000425821 331 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 RN7SL636P-201ENST00000497504 294 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.694-201ENST00000516677 117 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 RNA5SP54-201ENST00000516951 92 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 AC090897.2-201ENST00000581715 130 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 AC091564.4-201ENST00000533934 2194 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 CUL1P1-201ENST00000509510 2425 ntBASIC1.98□□□□□ -2.09
NOTCH3Q9UM47 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNU4-10P-201ENST00000364383 140 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.294-201ENST00000364916 102 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.393-201ENST00000383936 102 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNU6-376P-201ENST00000384731 106 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.584-201ENST00000391090 114 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 YPEL5P1-201ENST00000419731 367 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AL135790.2-201ENST00000437701 267 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 SNORD33.1-201ENST00000516213 88 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNU6-1231P-201ENST00000517185 103 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC022790.1-201ENST00000522872 204 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC016256.1-201ENST00000547971 354 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 MIR4644-201ENST00000579929 84 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC004467.1-201ENST00000615678 330 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNU6-727P-201ENST00000363592 107 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.368-201ENST00000365547 113 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 MIR3074-201ENST00000384885 81 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 MIR518E-201ENST00000385252 88 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNU6-381P-201ENST00000391259 108 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.595-201ENST00000410403 105 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNA5SP274-201ENST00000410484 108 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AL158823.1-201ENST00000418441 478 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC018634.1-201ENST00000437554 401 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 HMGB3P8-201ENST00000449709 577 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 MTATP6P7-201ENST00000453315 681 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC245047.8-201ENST00000456455 284 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 Y_RNA.651-201ENST00000459380 103 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RPL30P12-201ENST00000474666 353 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC010265.1-201ENST00000513509 211 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 SNORD116-26-201ENST00000516006 96 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RNU2-56P-201ENST00000516826 190 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 RN7SKP234-201ENST00000517173 224 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 CKS1BP7-201ENST00000522230 235 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 MIR1273D-201ENST00000577266 86 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC011603.4-201ENST00000611325 277 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AL591926.4-201ENST00000616895 298 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AP001340.1-201ENST00000624405 217 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC096644.4-201ENST00000563417 2912 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AC093831.2-201ENST00000624393 3427 ntBASIC1.97□□□□□ -2.09
NOTCH3Q9UM47 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 SNORD115-30-201ENST00000364117 82 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU6-643P-201ENST00000384018 107 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNU6-588P-201ENST00000410281 105 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 ELOCP21-201ENST00000412558 336 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AL356867.1-201ENST00000429623 299 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 U8.19-201ENST00000459095 133 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP320-201ENST00000516263 124 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 RNA5SP165-201ENST00000517142 115 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 AP002001.1-203ENST00000534002 267 ntBASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.96□□□□□ -2.1
NOTCH3Q9UM47 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms