Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.51-201ENST00000362725 102 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU6-254P-201ENST00000363377 107 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.194-201ENST00000363985 102 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.295-201ENST00000364918 102 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 SNORA36A-201ENST00000384221 132 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.481-201ENST00000384373 102 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 MIR200A-201ENST00000384875 90 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 CALM2P3-201ENST00000400429 449 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 MIR891A-201ENST00000401237 79 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AL117342.1-201ENST00000404861 406 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AL356010.1-201ENST00000456364 102 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 CCDC34P1-201ENST00000507441 517 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU6-344P-201ENST00000516635 111 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 CENPUP1-201ENST00000526649 1202 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 APOOP3-201ENST00000536787 586 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC133485.1-201ENST00000567176 124 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC138907.6-201ENST00000568401 126 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AL357312.1-201ENST00000603879 298 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC063944.3-201ENST00000609969 533 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC137590.2-201ENST00000619709 240 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC022079.1-201ENST00000621546 602 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 SCARNA4-201ENST00000629045 128 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 SNORA43.4-201ENST00000629559 138 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU1-76P-201ENST00000362903 159 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU5B-2P-201ENST00000363036 113 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.287-201ENST00000364853 94 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 Y_RNA.553-201ENST00000384670 102 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU6-780P-201ENST00000391030 104 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 DEFB108C-201ENST00000400154 252 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 MIR1253-201ENST00000408273 105 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 MIR320B2-201ENST00000408479 138 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 MIR1197-201ENST00000408818 88 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC012306.1-201ENST00000423267 114 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 USP9YP14-201ENST00000430663 563 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU7-63P-201ENST00000459054 62 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC091435.1-201ENST00000505442 584 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU6-1088P-201ENST00000516850 104 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 DEFB131C-201ENST00000528817 165 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC091178.2-201ENST00000584401 117 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AL513534.2-201ENST00000603836 250 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 BX284668.6-201ENST00000606899 438 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 MIR8076-201ENST00000611401 83 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC021506.2-201ENST00000612354 169 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.54□□□□□ -2.32
CCDC88CQ9P219 AC068137.3-201ENST00000639191 341 ntBASIC0.54□□□□□ -2.32
CCDC88CQ9P219 RNU5F-3P-201ENST00000363767 117 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
CCDC88CQ9P219 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.53□□□□□ -2.32
CCDC88CQ9P219 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC88CQ9P219 MTCO2P16-201ENST00000436962 677 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 MTCO3P18-201ENST00000440206 761 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC88CQ9P219 RPL39P38-201ENST00000467018 153 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 SNORD111.1-201ENST00000516421 86 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.53□□□□□ -2.32
CCDC88CQ9P219 AC103705.1-201ENST00000619013 241 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 AC073534.2-201ENST00000620377 381 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 SNORD3E-202ENST00000627253 216 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC88CQ9P219 AC008163.1-202ENST00000636004 2889 ntBASIC0.53□□□□□ -2.32
CCDC88CQ9P219 MTND5P26-201ENST00000426018 1752 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.251-201ENST00000364551 99 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.393-201ENST00000383936 102 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.402-201ENST00000383972 102 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 MIR517A-201ENST00000385001 87 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 MIR10B-201ENST00000385011 110 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-648P-201ENST00000410190 107 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-1186P-201ENST00000410429 97 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 Z82188.1-201ENST00000436709 154 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 MTCO3P8-201ENST00000453691 755 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU7-167P-201ENST00000459160 62 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU7-57P-201ENST00000459540 60 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-1208P-201ENST00000459588 107 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC092989.1-201ENST00000481235 277 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AL133373.1-201ENST00000497098 94 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 TRBVA-201ENST00000498804 316 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC019235.1-201ENST00000503847 207 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC010486.3-201ENST00000511602 785 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC067942.3-201ENST00000512025 362 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC025465.4-201ENST00000513422 638 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-322P-201ENST00000516010 103 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC0.52□□□□□ -2.33
CCDC88CQ9P219 AC007014.2-201ENST00000615581 479 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-727P-201ENST00000363592 107 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 SNORD113-7-201ENST00000363762 77 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-1240P-201ENST00000365155 104 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 SNORA69-201ENST00000383895 132 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 Y_RNA.409-201ENST00000383990 98 ntBASIC0.52□□□□□ -2.33
CCDC88CQ9P219 RNU6-38P-201ENST00000384085 107 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 268.8 ms