Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 EIF4A1P12-201ENST00000551910 141 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 RN7SL703P-201ENST00000578485 302 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 MIR5685-201ENST00000579080 79 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 POLR3GP1-201ENST00000594073 261 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 AL137843.1-201ENST00000605078 385 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 AL442128.1-201ENST00000615151 90 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 AL035470.1-201ENST00000622571 220 ntBASIC3.03□□□□□ -1.92
ZCCHC4Q9H5U6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.03□□□□□ -1.93
ZCCHC4Q9H5U6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-674P-201ENST00000363831 107 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP479-201ENST00000364858 117 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-1152P-201ENST00000384576 107 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 U8.12-201ENST00000384701 133 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 MIR891A-201ENST00000401237 79 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 MIR1263-201ENST00000408324 86 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU2-55P-201ENST00000411146 174 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 NDUFS5P4-201ENST00000412983 318 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AL445584.1-201ENST00000431451 330 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-437P-201ENST00000459408 95 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-109P-201ENST00000516364 107 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-412P-201ENST00000516434 106 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-184P-201ENST00000516514 107 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 RNU2-44P-201ENST00000516795 194 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AC107934.2-201ENST00000518653 310 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 HSPE1P5-201ENST00000561489 272 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AC025281.1-201ENST00000567026 265 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AL049861.1-201ENST00000603130 150 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AC097639.2-201ENST00000603159 172 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AC025521.1-201ENST00000621624 286 ntBASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
ZCCHC4Q9H5U6 AC002543.1-201ENST00000299783 1954 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 AC103988.1-201ENST00000566382 2177 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 Y_RNA.634-201ENST00000364811 113 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP125-201ENST00000364843 120 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 MIR518C-201ENST00000384822 101 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP496-201ENST00000391240 109 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 AL133475.1-201ENST00000404414 305 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 GOT2P5-201ENST00000433995 546 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 SNORA70.12-201ENST00000516084 153 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 SNORA40.13-201ENST00000516379 120 ntBASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
ZCCHC4Q9H5U6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 SNORD18B-201ENST00000365659 72 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-1014P-201ENST00000383940 103 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 Y_RNA.528-201ENST00000384575 108 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 AL353705.1-201ENST00000433468 480 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 AL121890.1-201ENST00000435457 205 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 AL021397.1-201ENST00000451806 248 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP236-201ENST00000516169 116 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-1299P-201ENST00000516316 100 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-65P-201ENST00000516332 98 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 RNU6-94P-201ENST00000607728 107 ntBASIC3□□□□□ -1.93
ZCCHC4Q9H5U6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 SNORD114-7-201ENST00000362520 77 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 SNORD9-201ENST00000362566 104 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNU4-41P-201ENST00000364426 143 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP51-201ENST00000364750 119 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 Y_RNA.323-201ENST00000365157 109 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 SNORD78.1-201ENST00000390866 65 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 AL139095.1-201ENST00000404326 391 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 SNORA19.1-201ENST00000410656 129 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 AL139281.1-201ENST00000422120 335 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 VDAC1P3-201ENST00000434069 851 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 Z75741.1-201ENST00000446793 314 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RPL23AP54-201ENST00000495129 419 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP385-201ENST00000515947 110 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNU1-143P-201ENST00000516296 146 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP153-201ENST00000516498 76 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNA5SP395-201ENST00000516567 118 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNU1-104P-201ENST00000517280 175 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 U1.23-201ENST00000610293 146 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 AC019176.2-201ENST00000611579 315 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 RNU1-68P-201ENST00000615382 146 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 U1.39-201ENST00000621562 146 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 U4.6-201ENST00000621618 127 ntBASIC2.99□□□□□ -1.93
ZCCHC4Q9H5U6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZCCHC4Q9H5U6 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZCCHC4Q9H5U6 AC008264.2-201ENST00000610193 3731 ntBASIC2.98□□□□□ -1.93
ZCCHC4Q9H5U6 AL356292.1-201ENST00000283110 373 ntBASIC2.98□□□□□ -1.93
ZCCHC4Q9H5U6 MIR590-201ENST00000385008 97 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 166 ms