Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNU6-743P-201ENST00000364151 106 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 SNORA63C-201ENST00000364578 129 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 RNU6-901P-201ENST00000384593 106 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 MIR190B-201ENST00000401119 79 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 RNU4-27P-201ENST00000410889 139 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 MTCO2P1-201ENST00000424648 477 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC093019.1-201ENST00000443135 252 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 OR6C5P-201ENST00000452388 923 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 AL442663.2-201ENST00000554385 511 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 RBM11P1-201ENST00000604951 799 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 AC106754.2-201ENST00000623006 233 ntBASIC-0.75□□□□□ -2.53
COL12A1Q99715 RNU6-621P-201ENST00000364752 109 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 MIR147A-201ENST00000385079 72 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 TAF13P2-201ENST00000416876 286 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 AC023512.1-201ENST00000444513 499 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 ART2BP-201ENST00000453501 499 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 RNU6-475P-201ENST00000516073 104 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 MIRLET7B-201ENST00000385140 83 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 USP9YP14-201ENST00000430663 563 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 AC104073.1-201ENST00000451988 151 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.76□□□□□ -2.53
COL12A1Q99715 AP002001.1-203ENST00000534002 267 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 MIR4280-201ENST00000582178 76 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-0.76□□□□□ -2.53
COL12A1Q99715 AC010332.2-201ENST00000613083 1904 ntBASIC-0.76□□□□□ -2.53
COL12A1Q99715 Y_RNA.39-201ENST00000362620 98 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 MIR301A-201ENST00000385261 86 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.77□□□□□ -2.53
COL12A1Q99715 AC090049.2-201ENST00000550377 109 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-0.77□□□□□ -2.53
COL12A1Q99715 MIR1248-201ENST00000629190 106 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 AC017104.5-201ENST00000637647 639 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 snoU2_19.1-201ENST00000362361 80 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 AL355143.1-201ENST00000407101 841 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 RNU6-57P-201ENST00000411348 103 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 MTCO2P23-201ENST00000425216 680 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 USMG5P1-201ENST00000425964 177 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.77□□□□□ -2.53
COL12A1Q99715 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC-0.77□□□□□ -2.53
COL12A1Q99715 SNORD18.2-201ENST00000459604 70 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 RNU6-410P-201ENST00000517006 107 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 RNU2-46P-201ENST00000517038 113 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 AC005332.6-201ENST00000613178 446 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 AC107075.1-201ENST00000613695 314 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.77□□□□□ -2.53
COL12A1Q99715 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.77□□□□□ -2.53
COL12A1Q99715 RNU6-369P-201ENST00000362515 102 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 SNORD115-44-201ENST00000365391 82 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-438P-201ENST00000365561 103 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-455P-201ENST00000384681 107 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AL109755.1-201ENST00000401791 649 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC073910.1-201ENST00000445047 438 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL12A1Q99715 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 SNORA25.16-201ENST00000516741 121 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AP002802.2-201ENST00000605877 235 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC004067.1-201ENST00000608733 700 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC087683.2-201ENST00000611384 326 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 MIR7-1-201ENST00000384871 110 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-293P-201ENST00000411259 106 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC007919.1-201ENST00000429380 217 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL12A1Q99715 Z99289.3-201ENST00000605586 594 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-1130P-201ENST00000365434 107 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-0.78□□□□□ -2.53
COL12A1Q99715 SKA2P1-201ENST00000425592 390 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 MTND1P31-201ENST00000449206 961 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU1-86P-201ENST00000516108 154 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU1-107P-201ENST00000516617 154 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC006600.1-201ENST00000572529 153 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 AC078795.3-201ENST00000602913 472 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-86P-201ENST00000606534 107 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 MIR6507-201ENST00000613630 70 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 FRG1KP-201ENST00000623592 341 ntBASIC-0.78□□□□□ -2.53
COL12A1Q99715 RNU6-179P-201ENST00000363350 107 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 RNU6-187P-201ENST00000384139 106 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 Y_RNA.513-201ENST00000384522 100 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 AL606845.1-201ENST00000404881 255 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 RNU6-588P-201ENST00000410281 105 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC-0.79□□□□□ -2.54
COL12A1Q99715 MTND1P30-201ENST00000441241 901 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 MTCO2P7-201ENST00000446518 666 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 SNORA18.7-201ENST00000516910 131 ntBASIC-0.79□□□□□ -2.54
COL12A1Q99715 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
COL12A1Q99715 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-0.79□□□□□ -2.54
COL12A1Q99715 AC060788.1-201ENST00000521318 469 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms