Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-199P-201ENST00000362954 107 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-969P-201ENST00000383900 105 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 SNORA40.19-201ENST00000390846 128 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 RNY4P18-201ENST00000391107 89 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 SNORA26.3-201ENST00000391119 136 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR208B-201ENST00000401172 77 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 RN7SL75P-201ENST00000461926 281 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 RPL31P41-201ENST00000477967 372 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 RN7SKP164-201ENST00000516138 266 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 RNU6-56P-201ENST00000516986 93 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 AC007536.1-201ENST00000533382 349 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 AC009163.5-201ENST00000575421 637 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 MIR7106-201ENST00000612419 65 ntBASIC3.03□□□□□ -1.92
CDK5RAP1Q96SZ6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
CDK5RAP1Q96SZ6 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC092268.1-201ENST00000342691 405 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-622P-201ENST00000384272 103 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORD37.2-201ENST00000391075 66 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 RNA5SP252-201ENST00000391131 119 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AL031003.1-201ENST00000404229 172 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 RPS26P42-201ENST00000413485 326 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 PTGES3P4-201ENST00000426243 356 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC078809.1-201ENST00000427601 140 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 RPL37P4-201ENST00000448908 268 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC007215.1-201ENST00000464893 276 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC090897.2-201ENST00000581715 130 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 ELOCP29-201ENST00000588193 334 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 HSPE1P7-201ENST00000604681 321 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC006386.2-201ENST00000624491 75 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC012005.1-201ENST00000624575 75 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORD98-201ENST00000636377 67 ntBASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDK5RAP1Q96SZ6 AC138915.1-201ENST00000565427 1685 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 MTND5P32-201ENST00000560711 1802 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORD115-30-201ENST00000364117 82 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1336P-201ENST00000383886 109 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-768P-201ENST00000384683 107 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 RNA5SP504-201ENST00000410676 117 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 AL139281.1-201ENST00000422120 335 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 RNA5SP367-201ENST00000516557 118 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU2-56P-201ENST00000516826 190 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU1-117P-201ENST00000517041 158 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 AC136628.3-201ENST00000521868 290 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 AC006380.1-201ENST00000603598 186 ntBASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 TEX41-243ENST00000614173 190 ntTSL 5 BASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDK5RAP1Q96SZ6 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-270P-201ENST00000364131 105 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 U8.9-201ENST00000365667 134 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORA72.4-201ENST00000384174 132 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-588P-201ENST00000410281 105 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 AL121914.1-201ENST00000450188 156 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 CKS1BP7-201ENST00000522230 235 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 MIR3609-201ENST00000582661 80 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 ADAM3A-203ENST00000461344 2157 ntBASIC3□□□□□ -1.93
CDK5RAP1Q96SZ6 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-235P-201ENST00000362644 107 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORA80A-201ENST00000363922 136 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 MIR539-201ENST00000365690 78 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1056P-201ENST00000383996 107 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORA18.3-201ENST00000384122 132 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-1310P-201ENST00000384153 107 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORA8.3-201ENST00000384679 139 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 SNORA26.7-201ENST00000391288 122 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 CBX3P9-201ENST00000402326 552 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU6-383P-201ENST00000410864 94 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 AL135938.1-201ENST00000443141 297 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 Z96811.1-201ENST00000445880 108 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 AC074290.1-201ENST00000448883 135 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RPL30P5-201ENST00000494923 336 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 RNA5SP76-201ENST00000516277 87 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 ACA59.2-201ENST00000517061 156 ntBASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.99□□□□□ -1.93
CDK5RAP1Q96SZ6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms