Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 MIR4771-1-201ENST00000582617 74 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC064872.1-201ENST00000604823 1072 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 RNU6-374P-201ENST00000364146 108 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 RNU6-448P-201ENST00000517052 107 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 AC239868.4-201ENST00000608318 671 ntBASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC-1.9□□□□□ -2.71
VPS13AQ96RL7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.91□□□□□ -2.71
VPS13AQ96RL7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-1.91□□□□□ -2.71
VPS13AQ96RL7 AC010975.3-201ENST00000618727 978 ntBASIC-1.91□□□□□ -2.71
VPS13AQ96RL7 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.91□□□□□ -2.72
VPS13AQ96RL7 Z82210.1-201ENST00000440037 231 ntBASIC-1.91□□□□□ -2.72
VPS13AQ96RL7 RNU6-678P-201ENST00000516832 109 ntBASIC-1.91□□□□□ -2.72
VPS13AQ96RL7 MIR3921-201ENST00000577308 85 ntBASIC-1.91□□□□□ -2.72
VPS13AQ96RL7 BX276092.1-201ENST00000427368 251 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 HGF-207ENST00000453018 721 ntTSL 3 BASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 TPRKBP2-201ENST00000565969 475 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 RNU1-29P-201ENST00000606574 126 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 MIR518F-201ENST00000384973 87 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 U8.16-201ENST00000391279 133 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 TAAR7P-201ENST00000436141 242 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 BTBD7P2-201ENST00000441962 620 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 BNIP3P24-201ENST00000593398 557 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 AL137246.1-201ENST00000607072 977 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 RNU6-511P-201ENST00000363496 107 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 MIR802-201ENST00000390235 94 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 RPS24P1-201ENST00000438550 371 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 AC023512.1-201ENST00000444513 499 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 MTND2P33-201ENST00000506452 1031 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 AC018448.1-201ENST00000552843 316 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 MIR466-201ENST00000580653 84 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 AC099654.8-201ENST00000637757 681 ntBASIC-1.92□□□□□ -2.72
VPS13AQ96RL7 RNU4-76P-201ENST00000364509 141 ntBASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 PRDX4P1-201ENST00000507189 574 ntBASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 AC079395.1-201ENST00000510981 262 ntBASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 RNU6-63P-201ENST00000516690 95 ntBASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 AC010525.2-201ENST00000590920 195 ntBASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 AC107075.1-201ENST00000613695 314 ntBASIC-1.93□□□□□ -2.72
VPS13AQ96RL7 RNU6-169P-201ENST00000365336 107 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 RNU6-217P-201ENST00000384164 104 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 RNU6-123P-201ENST00000516163 102 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 SUMO2P18-201ENST00000518873 252 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 AC093249.1-201ENST00000567049 203 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 SNORD24-201ENST00000383884 75 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 MTND3P8-201ENST00000412909 339 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 AL050341.1-201ENST00000447743 313 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 AC068587.4-201ENST00000533893 186 ntBASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC-1.94□□□□□ -2.72
VPS13AQ96RL7 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 AC010154.1-201ENST00000425857 269 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 RNU6-28P-201ENST00000362378 107 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 RNA5SP56-201ENST00000410277 118 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 AC092447.3-201ENST00000426027 686 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 MTATP6P26-201ENST00000445926 662 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 AC245014.2-201ENST00000603689 287 ntBASIC-1.95□□□□□ -2.72
VPS13AQ96RL7 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 RNU6-31P-201ENST00000384388 108 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 MTCYBP15-201ENST00000433123 1127 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 MIR6818-201ENST00000621576 65 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 AL355143.1-201ENST00000407101 841 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 RNU6-1304P-201ENST00000411374 106 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 MIR215-201ENST00000384858 110 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 MIR29B1-201ENST00000385015 81 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 MTATP6P20-201ENST00000414147 562 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 FO393419.3-201ENST00000428741 282 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 HIGD1AP6-201ENST00000521833 279 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 AL109620.1-201ENST00000618738 1197 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 AC091304.10-201ENST00000641554 121 ntBASIC-1.96□□□□□ -2.72
VPS13AQ96RL7 Y_RNA.174-201ENST00000363781 105 ntBASIC-1.97□□□□□ -2.72
VPS13AQ96RL7 TMSB4XP6-201ENST00000415187 135 ntBASIC-1.97□□□□□ -2.72
VPS13AQ96RL7 SUMO1P3-201ENST00000439961 304 ntBASIC-1.97□□□□□ -2.72
VPS13AQ96RL7 AL353813.1-201ENST00000440700 253 ntBASIC-1.97□□□□□ -2.72
VPS13AQ96RL7 MTCO2P7-201ENST00000446518 666 ntBASIC-1.97□□□□□ -2.72
VPS13AQ96RL7 AC010205.1-201ENST00000616668 449 ntBASIC-1.97□□□□□ -2.72
VPS13AQ96RL7 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.97□□□□□ -2.73
VPS13AQ96RL7 MTCO3P40-201ENST00000392516 676 ntBASIC-1.97□□□□□ -2.73
VPS13AQ96RL7 RNU6-466P-201ENST00000391224 103 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 TUG1_4.1-201ENST00000619464 181 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 RNU5B-2P-201ENST00000363036 113 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 SNORD115-33-201ENST00000363723 82 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 RNU6-944P-201ENST00000364023 107 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 RNU6-588P-201ENST00000410281 105 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 RNU5B-3P-201ENST00000516601 115 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 AL353997.4-201ENST00000586196 166 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 AL513423.1-201ENST00000621695 132 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 RNU6-199P-201ENST00000362954 107 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 MTND2P8-201ENST00000450555 1025 ntBASIC-1.98□□□□□ -2.73
VPS13AQ96RL7 MTCO3P8-201ENST00000453691 755 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms