Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-505P-201ENST00000384427 107 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 RNU6-1054P-201ENST00000411293 104 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 Z82188.1-201ENST00000436709 154 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 AC083904.1-201ENST00000487828 231 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 RNU7-99P-201ENST00000516271 62 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 RNU6-1198P-201ENST00000516904 67 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 AC027288.2-201ENST00000553028 243 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 AP000770.2-201ENST00000623694 100 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 AC068137.3-201ENST00000639191 341 ntBASIC0.89□□□□□ -2.27
ECHDC3Q96DC8 MTND4P12-201ENST00000498999 1377 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 MIR653-201ENST00000385279 96 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AC245047.3-201ENST00000429428 127 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 ERLEC1P1-201ENST00000433806 578 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 MTCO2P30-201ENST00000503662 364 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AC103851.1-201ENST00000506833 274 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 RN7SKP49-201ENST00000516675 260 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AL137100.2-201ENST00000555786 315 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 MIR4452-201ENST00000583004 71 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 FAM71BP1-201ENST00000604431 523 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 MIR6734-201ENST00000621166 68 ntBASIC0.88□□□□□ -2.27
ECHDC3Q96DC8 AC027514.1-201ENST00000588561 1603 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 RNU6-1085P-201ENST00000363576 107 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 SNORD87-201ENST00000364849 89 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 MIR520E-201ENST00000384867 87 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 MIR32-201ENST00000384965 70 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AL590002.1-201ENST00000406554 418 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 MTND1P11-201ENST00000456661 876 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.693-201ENST00000516641 110 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AC211469.2-201ENST00000605461 205 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AL021879.1-201ENST00000611756 288 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 AL359880.1-201ENST00000621879 266 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 MIR6863-201ENST00000636112 90 ntBASIC0.87□□□□□ -2.27
ECHDC3Q96DC8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.151-201ENST00000363566 112 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.319-201ENST00000365138 92 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 RNU6-95P-201ENST00000384697 107 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 MIR660-201ENST00000385235 97 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 MIR518E-201ENST00000385252 88 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 RNU11-5P-201ENST00000391216 129 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 MTCO3P40-201ENST00000392516 676 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AL034345.1-201ENST00000407768 123 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 RNU6-1068P-201ENST00000410958 103 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AL353572.1-201ENST00000442490 417 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.673-201ENST00000516306 88 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 SNORA25.14-201ENST00000516481 132 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 SNORA70.22-201ENST00000517160 124 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 CBX3P8-201ENST00000532412 525 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 FAM106DP-201ENST00000586416 501 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AL162424.1-201ENST00000602325 221 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AC073349.3-201ENST00000617616 186 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 AC124864.2-201ENST00000624736 186 ntBASIC0.86□□□□□ -2.27
ECHDC3Q96DC8 RNU6-873P-201ENST00000363833 107 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.372-201ENST00000365599 102 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU6-17P-201ENST00000384245 107 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU6-18P-201ENST00000384527 107 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 MIR153-2-201ENST00000385225 87 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU6-159P-201ENST00000391080 106 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU6-1186P-201ENST00000410429 97 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 MTND1P26-201ENST00000440488 538 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 DAP3P1-201ENST00000441522 278 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU7-66P-201ENST00000459469 62 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 AC010486.3-201ENST00000511602 785 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.665-201ENST00000516177 98 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNA5SP220-201ENST00000516298 104 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 SCARNA16.2-201ENST00000516520 172 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU6-405P-201ENST00000516637 110 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 AC010620.1-201ENST00000601088 1102 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RN7SKP299-201ENST00000606679 301 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 AC245008.1-201ENST00000608123 476 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 AC006504.8-201ENST00000621046 635 ntBASIC0.85□□□□□ -2.27
ECHDC3Q96DC8 RNU4-79P-201ENST00000362764 141 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.100-201ENST00000363141 102 ntBASIC0.84□□□□□ -2.27
ECHDC3Q96DC8 Y_RNA.118-201ENST00000363300 101 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms