Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 MIR3910-1-201ENST00000580936 111 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 AL356280.1-201ENST00000603614 379 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 AC013412.1-201ENST00000610687 192 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 AC084757.4-201ENST00000616350 526 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 AC006435.5-201ENST00000624486 112 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 MIR1248-201ENST00000629190 106 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 MTND1P7-201ENST00000632801 297 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 AC093831.2-201ENST00000624393 3427 ntBASIC3.34□□□□□ -1.87
PHC3Q8NDX5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.34□□□□□ -1.88
PHC3Q8NDX5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
PHC3Q8NDX5 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PHC3Q8NDX5 RNU6-418P-201ENST00000384035 107 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 MIR518C-201ENST00000384822 101 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 MIR526A2-201ENST00000390198 65 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.33□□□□□ -1.88
PHC3Q8NDX5 TMSB4XP3-201ENST00000445144 114 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 RN7SL601P-201ENST00000471221 293 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 RNU1-143P-201ENST00000516296 146 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 RNU6-1337P-201ENST00000516525 95 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
PHC3Q8NDX5 U1.23-201ENST00000610293 146 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 AC096577.2-201ENST00000611455 153 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 RNU1-68P-201ENST00000615382 146 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 U1.39-201ENST00000621562 146 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 AC068647.2-201ENST00000637380 353 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PHC3Q8NDX5 AC008264.2-201ENST00000610193 3731 ntBASIC3.33□□□□□ -1.88
PHC3Q8NDX5 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PHC3Q8NDX5 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHC3Q8NDX5 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PHC3Q8NDX5 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PHC3Q8NDX5 Y_RNA.272-201ENST00000364696 102 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 RNU6-275P-201ENST00000364910 107 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 Y_RNA.398-201ENST00000383952 99 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 RPL21P3-201ENST00000395517 478 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 MIR887-201ENST00000401258 79 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 MIR1289-1-201ENST00000408836 144 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 RPL23AP58-201ENST00000440453 469 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 AL137159.1-201ENST00000452808 512 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 AC008155.2-201ENST00000464337 397 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 RNA5SP20-201ENST00000515976 84 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 AC025647.1-201ENST00000517879 253 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 AC027419.1-201ENST00000522976 328 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.32□□□□□ -1.88
PHC3Q8NDX5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.32□□□□□ -1.88
PHC3Q8NDX5 MIR4724-201ENST00000579485 89 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 MIR4744-201ENST00000581563 82 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 MIR548AY-201ENST00000617669 107 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 MIR7975-201ENST00000619350 68 ntBASIC3.32□□□□□ -1.88
PHC3Q8NDX5 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.31□□□□□ -1.88
PHC3Q8NDX5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
PHC3Q8NDX5 MIR367-201ENST00000362299 68 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 RNU1-35P-201ENST00000362782 153 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 RNA5SP383-201ENST00000362934 120 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 RNU6-743P-201ENST00000364151 106 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 RNU6-1240P-201ENST00000365155 104 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 Y_RNA.580-201ENST00000391004 95 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 EBAG9P1-201ENST00000418955 543 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 MTND5P41-201ENST00000517498 206 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.31□□□□□ -1.88
PHC3Q8NDX5 MIR3944-201ENST00000581277 108 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 MIR3616-201ENST00000584070 92 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 AL355297.2-201ENST00000604792 129 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 AC004832.4-201ENST00000608952 331 ntBASIC3.31□□□□□ -1.88
PHC3Q8NDX5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC3.31□□□□□ -1.88
PHC3Q8NDX5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PHC3Q8NDX5 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PHC3Q8NDX5 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.3□□□□□ -1.88
PHC3Q8NDX5 AL355596.1-201ENST00000565399 3996 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.3□□□□□ -1.88
PHC3Q8NDX5 AL157777.2-201ENST00000258070 137 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
PHC3Q8NDX5 SNORA63.1-201ENST00000362493 131 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 Y_RNA.24-201ENST00000362508 103 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 RNU4-10P-201ENST00000364383 140 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 MIR613-201ENST00000385248 95 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 snoU13.22-201ENST00000459428 104 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 RN7SL75P-201ENST00000461926 281 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 RPL36AP21-201ENST00000490372 323 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.3□□□□□ -1.88
PHC3Q8NDX5 SNORA4.4-201ENST00000515921 135 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 RNU7-116P-201ENST00000516940 62 ntBASIC3.3□□□□□ -1.88
PHC3Q8NDX5 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
PHC3Q8NDX5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PHC3Q8NDX5 RNU1-23P-201ENST00000363361 144 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 Y_RNA.172-201ENST00000363765 102 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 RNA5SP387-201ENST00000364226 106 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 U8.7-201ENST00000364940 136 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 RNU6-969P-201ENST00000383900 105 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 RNU6-449P-201ENST00000383914 107 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 SNORD116-18-201ENST00000383961 92 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 SNORA19-201ENST00000384737 128 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 MIR561-201ENST00000385216 97 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 RNU6-578P-201ENST00000390980 103 ntBASIC3.29□□□□□ -1.88
PHC3Q8NDX5 SNORA11.1-201ENST00000408133 129 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms