Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 RNA5SP511-201ENST00000410487 115 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 AC010531.2-201ENST00000465012 153 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 RPS29P21-201ENST00000496272 170 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 SEM1P1-201ENST00000506694 209 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.8□□□□□ -1.8
SIX5Q8N196 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.8□□□□□ -1.8
SIX5Q8N196 MIR486-1-201ENST00000612171 68 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 AC012640.5-201ENST00000623897 319 ntBASIC3.8□□□□□ -1.8
SIX5Q8N196 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX5Q8N196 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SIX5Q8N196 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SIX5Q8N196 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.79□□□□□ -1.8
SIX5Q8N196 AC058791.1-201ENST00000608412 3198 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
SIX5Q8N196 Y_RNA.353-201ENST00000365440 108 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 Y_RNA.432-201ENST00000384087 111 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 SNORD20-201ENST00000384550 80 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 MICF-203ENST00000432679 129 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 HMGN2P18-201ENST00000450680 270 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 UBE2DNL-203ENST00000474922 222 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.79□□□□□ -1.8
SIX5Q8N196 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC3.79□□□□□ -1.8
SIX5Q8N196 RNU2-27P-201ENST00000516185 142 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 AC015720.1-201ENST00000565251 277 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 MIR378D2-201ENST00000580636 98 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 AL137849.1-201ENST00000604767 169 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 SNORA62.6-201ENST00000606322 83 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 U7.2-201ENST00000607576 63 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 AL365361.1-201ENST00000566942 3481 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.79□□□□□ -1.8
SIX5Q8N196 AP003122.5-201ENST00000527668 3766 ntBASIC3.79□□□□□ -1.8
SIX5Q8N196 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX5Q8N196 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX5Q8N196 AC080128.1-201ENST00000474389 1917 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX5Q8N196 RNU6-743P-201ENST00000364151 106 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 SNORA72-201ENST00000384339 132 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 RNU6-136P-201ENST00000384663 107 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SIX5Q8N196 FO393413.1-201ENST00000402892 195 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 RNU2-32P-201ENST00000411193 191 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 CYP2C59P-201ENST00000457790 269 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 AC090515.1-201ENST00000465295 476 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 RN7SL585P-201ENST00000470538 280 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 RNU4-57P-201ENST00000515980 135 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 Y_RNA.686-201ENST00000516548 134 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 RNU6-1231P-201ENST00000517185 103 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX5Q8N196 AL049861.1-201ENST00000603130 150 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 AP001340.1-201ENST00000624405 217 ntBASIC3.78□□□□□ -1.8
SIX5Q8N196 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SIX5Q8N196 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.78□□□□□ -1.8
SIX5Q8N196 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.78□□□□□ -1.81
SIX5Q8N196 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX5Q8N196 MIR1253-201ENST00000408273 105 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 AC245047.4-201ENST00000433189 144 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 AL161788.1-201ENST00000441805 169 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 SNRPGP8-201ENST00000454064 226 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX5Q8N196 SNORA4.4-201ENST00000515921 135 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 RNU6-197P-201ENST00000516680 100 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.77□□□□□ -1.81
SIX5Q8N196 AC093331.1-201ENST00000521474 169 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 MIR2681-201ENST00000581814 105 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 MIR4438-201ENST00000585271 93 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 YPEL5P2-201ENST00000605553 359 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 MIR7851-201ENST00000610611 160 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 MIR1248-201ENST00000629190 106 ntBASIC3.77□□□□□ -1.81
SIX5Q8N196 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.77□□□□□ -1.81
SIX5Q8N196 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SIX5Q8N196 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX5Q8N196 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX5Q8N196 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX5Q8N196 RNU6-597P-201ENST00000365620 102 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 MIR1278-201ENST00000408753 81 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 RNU2-55P-201ENST00000411146 174 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 AC009969.1-201ENST00000438726 172 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 AC025554.1-201ENST00000505641 188 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 RNU6-1299P-201ENST00000516316 100 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 AC093732.2-201ENST00000607950 274 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.76□□□□□ -1.81
SIX5Q8N196 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
SIX5Q8N196 AL773545.4-201ENST00000637262 310 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 AL513478.4-201ENST00000641636 310 ntBASIC3.76□□□□□ -1.81
SIX5Q8N196 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIX5Q8N196 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
SIX5Q8N196 RNU6-915P-201ENST00000364943 103 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 RNU6-117P-201ENST00000365415 107 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 Y_RNA.584-201ENST00000391090 114 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 RNU6-1328P-201ENST00000410938 106 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 AC016909.1-201ENST00000415916 166 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 AC025518.1-201ENST00000479856 347 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 PHBP14-201ENST00000512887 367 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX5Q8N196 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX5Q8N196 AC120024.3-201ENST00000603167 156 ntBASIC3.75□□□□□ -1.81
SIX5Q8N196 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX5Q8N196 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms