Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPAS3Q8IXF0 AC007496.3-201ENST00000624987 3443 ntBASIC3.92□□□□□ -1.78
NPAS3Q8IXF0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 RNU6-1229P-201ENST00000364295 107 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 Y_RNA.316-201ENST00000365118 111 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 Y_RNA.507-201ENST00000384500 99 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 RNA5SP39-201ENST00000411245 120 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 CYCSP48-201ENST00000417124 323 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 CYCSP35-201ENST00000451978 304 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 RNU4-60P-201ENST00000517239 135 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 AL161713.1-201ENST00000555538 145 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 AC091152.3-201ENST00000604227 325 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 SNORA62.6-201ENST00000606322 83 ntBASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NPAS3Q8IXF0 AC091564.4-201ENST00000533934 2194 ntBASIC3.9□□□□□ -1.78
NPAS3Q8IXF0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NPAS3Q8IXF0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS3Q8IXF0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS3Q8IXF0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NPAS3Q8IXF0 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS3Q8IXF0 RNU6-349P-201ENST00000362402 107 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 RNY1P6-201ENST00000384193 109 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 VDAC1P3-201ENST00000434069 851 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 AC009238.1-201ENST00000442165 424 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 RPS4XP11-201ENST00000446897 772 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 AC009237.6-201ENST00000446969 424 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 HMGN2P10-201ENST00000448085 265 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 RNU2-11P-201ENST00000459191 187 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 RNU7-57P-201ENST00000459540 60 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 RPS26P15-201ENST00000488067 348 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 NDUFA4P2-201ENST00000489989 244 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 RAC1P2-201ENST00000511164 579 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 AC021739.1-201ENST00000559631 174 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 MIR5195-201ENST00000583555 115 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 AL513534.2-201ENST00000603836 250 ntBASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS3Q8IXF0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 MAPK10-253ENST00000641010 4072 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 MFSD8-236ENST00000641509 4050 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 RPL32P35-201ENST00000415214 394 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 SNORD105B-201ENST00000458770 79 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 snoU13.4-201ENST00000458916 104 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 MIR4694-201ENST00000578534 80 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 AL356489.2-201ENST00000566968 3528 ntBASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NPAS3Q8IXF0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 AL049781.1-201ENST00000623195 3585 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 RNU6-888P-201ENST00000363010 101 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 Y_RNA.360-201ENST00000365512 102 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 Y_RNA.467-201ENST00000384297 102 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 SNORA18-201ENST00000384416 132 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 MIR490-201ENST00000384865 128 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 MIR605-201ENST00000385078 83 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 RNU6-1197P-201ENST00000391183 107 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 Y_RNA.607-201ENST00000410597 98 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 CYCSP4-201ENST00000429682 331 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 SNORA71B-202ENST00000439232 272 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 IFNWP4-201ENST00000453148 294 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 Y_RNA.659-201ENST00000515994 113 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 AC068657.1-201ENST00000520807 306 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 AC011604.1-201ENST00000545978 196 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 MIR5197-201ENST00000583721 112 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 AC006065.5-201ENST00000623427 349 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 MIR1255B1-201ENST00000636325 63 ntBASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NPAS3Q8IXF0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 RNU6-117P-201ENST00000365415 107 ntBASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 SNORA2.2-201ENST00000365473 135 ntBASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 MIR548A2-201ENST00000384956 97 ntBASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 MIR493-201ENST00000385254 89 ntBASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 RNU6-733P-201ENST00000410759 104 ntBASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.87□□□□□ -1.79
NPAS3Q8IXF0 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms