Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 snoZ196.1-201ENST00000625269 89 ntBASIC2.09□□□□□ -2.07
SHFQ7M4L6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.09□□□□□ -2.07
SHFQ7M4L6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SHFQ7M4L6 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SHFQ7M4L6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
SHFQ7M4L6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.09□□□□□ -2.08
SHFQ7M4L6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
SHFQ7M4L6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SHFQ7M4L6 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SHFQ7M4L6 AC062016.1-201ENST00000355719 319 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 Y_RNA.99-201ENST00000363138 105 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 Y_RNA.176-201ENST00000363815 109 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU1-91P-201ENST00000364746 163 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU6-1175P-201ENST00000365200 107 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 Y_RNA.333-201ENST00000365274 102 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU6-1235P-201ENST00000384559 107 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNA5SP475-201ENST00000410568 110 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU5A-5P-201ENST00000411054 116 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU6-57P-201ENST00000411348 103 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 EDDM3CP-201ENST00000415977 425 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU6-498P-201ENST00000459468 107 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.08□□□□□ -2.08
SHFQ7M4L6 RNU6-948P-201ENST00000516374 107 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 AP003733.2-201ENST00000529409 171 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.08□□□□□ -2.08
SHFQ7M4L6 MIR4319-201ENST00000577285 85 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 MIR3126-201ENST00000577443 74 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 LARP7P3-201ENST00000579888 337 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 AC013412.1-201ENST00000610687 192 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.08□□□□□ -2.08
SHFQ7M4L6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SHFQ7M4L6 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.08□□□□□ -2.08
SHFQ7M4L6 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SHFQ7M4L6 Y_RNA.149-201ENST00000363558 117 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 RNA5SP68-201ENST00000363885 119 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 SNORA72.2-201ENST00000365028 127 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 RNU6-1310P-201ENST00000384153 107 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 RNU4-30P-201ENST00000410245 143 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC025750.2-201ENST00000442609 450 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AL357134.1-201ENST00000445848 426 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC074290.1-201ENST00000448883 135 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 RNU6-221P-201ENST00000459541 99 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC090255.1-201ENST00000495779 349 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 RNU6-1143P-201ENST00000516125 104 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC021269.2-201ENST00000532318 330 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC026271.5-201ENST00000577873 130 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC006023.1-201ENST00000603944 259 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC022441.3-201ENST00000605737 136 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 SNORD14A-201ENST00000606526 91 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC103810.6-201ENST00000606708 136 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 MIR6817-201ENST00000615588 66 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC006386.2-201ENST00000624491 75 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 AC012005.1-201ENST00000624575 75 ntBASIC2.07□□□□□ -2.08
SHFQ7M4L6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SHFQ7M4L6 snoU2_19.2-201ENST00000363024 80 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 SNORD113-8-201ENST00000363497 74 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 SNORD114-6-201ENST00000364393 72 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 SNORA70.4-201ENST00000365509 134 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNU6-102P-201ENST00000384485 104 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 MIR215-201ENST00000384858 110 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNU6-1199P-201ENST00000411249 104 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 AC016909.1-201ENST00000415916 166 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.06□□□□□ -2.08
SHFQ7M4L6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNA5SP356-201ENST00000515972 94 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNU2-34P-201ENST00000516534 121 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNU6-856P-201ENST00000516959 98 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 RNU2-12P-201ENST00000517216 168 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC2.06□□□□□ -2.08
SHFQ7M4L6 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.06□□□□□ -2.08
SHFQ7M4L6 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.06□□□□□ -2.08
SHFQ7M4L6 AC005000.2-201ENST00000605468 310 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.06□□□□□ -2.08
SHFQ7M4L6 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
SHFQ7M4L6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHFQ7M4L6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SHFQ7M4L6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHFQ7M4L6 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHFQ7M4L6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SHFQ7M4L6 Y_RNA.286-201ENST00000364813 102 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNU1-52P-201ENST00000384190 164 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNU4-52P-201ENST00000384209 138 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 Y_RNA.581-201ENST00000391017 97 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNU2-54P-201ENST00000410299 190 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 Y_RNA.602-201ENST00000410535 92 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RN7SKP284-201ENST00000411002 343 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.05□□□□□ -2.08
SHFQ7M4L6 RPL23AP3-201ENST00000453844 468 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNU6-496P-201ENST00000516145 99 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNA5SP148-201ENST00000516527 94 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNA5SP137-201ENST00000516833 135 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 RNU7-110P-201ENST00000516891 62 ntBASIC2.05□□□□□ -2.08
SHFQ7M4L6 AC025647.1-201ENST00000517879 253 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 536.7 ms