Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RN7SL442P-201ENST00000473804 320 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 MIR378D2-201ENST00000580636 98 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 PWAR6-201ENST00000552334 4618 ntBASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
LRFN4Q6PJG9 AC058791.1-201ENST00000608412 3198 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.261-201ENST00000364631 102 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 RNA5SP293-201ENST00000410527 113 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 MTCO1P44-201ENST00000441935 243 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 CYCSP35-201ENST00000451978 304 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AC097462.1-201ENST00000514125 324 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 SNORA48.11-201ENST00000517015 89 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AP001328.1-201ENST00000528550 176 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AL160236.1-201ENST00000556317 195 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 MIR2681-201ENST00000581814 105 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 MIR4438-201ENST00000585271 93 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AL359881.1-201ENST00000602916 267 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AL356280.1-201ENST00000603614 379 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 AC011603.4-201ENST00000611325 277 ntBASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRFN4Q6PJG9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 RNU6-1180P-201ENST00000364935 107 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.432-201ENST00000384087 111 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 RNU6-588P-201ENST00000410281 105 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 AC010401.1-201ENST00000463867 348 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 SNORA4.4-201ENST00000515921 135 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 RNU6-197P-201ENST00000516680 100 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 PRELID2P1-201ENST00000552837 301 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 AL031274.2-201ENST00000599419 203 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 AL121772.2-201ENST00000614331 297 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.19□□□□□ -1.9
LRFN4Q6PJG9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.332-201ENST00000365271 113 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 RNU6-1080P-201ENST00000383982 107 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 RNU6-460P-201ENST00000391158 108 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 CYCSP19-201ENST00000411715 316 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AL035423.1-201ENST00000420331 213 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC123900.1-201ENST00000420390 96 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC245047.4-201ENST00000433189 144 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC023449.1-201ENST00000454464 154 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 RPS29P12-201ENST00000460178 152 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 RPS29P21-201ENST00000496272 170 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC023141.11-201ENST00000508864 202 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC093259.1-201ENST00000509755 300 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 RNU6-856P-201ENST00000516959 98 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 RNU7-172P-201ENST00000517125 64 ntBASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
LRFN4Q6PJG9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 SNORD9-201ENST00000362566 104 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 RNU6-743P-201ENST00000364151 106 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 Y_RNA.251-201ENST00000364551 99 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 RNU6-805P-201ENST00000365643 106 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 RNU2-63P-201ENST00000410792 194 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 ATP5A1P2-201ENST00000412323 255 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AC063976.3-201ENST00000426849 329 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AC025750.2-201ENST00000442609 450 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AP001486.1-201ENST00000463339 476 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 RNU6-1299P-201ENST00000516316 100 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AC090142.3-201ENST00000519012 385 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AL049861.1-201ENST00000603130 150 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 AC120024.3-201ENST00000603167 156 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 U7.2-201ENST00000607576 63 ntBASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LRFN4Q6PJG9 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms