Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.1□□□□□ -1.91
CDPF1Q6NVV7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.253-201ENST00000364562 112 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 Y_RNA.332-201ENST00000365271 113 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 SNORA51.5-201ENST00000384126 131 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 SNORA12.1-201ENST00000390873 148 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 SNORD77.3-201ENST00000391113 65 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 RNU2-32P-201ENST00000411193 191 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 AC011998.1-201ENST00000433403 117 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 RNU6-1146P-201ENST00000516282 102 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 RNU6-711P-201ENST00000517255 106 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 AC008011.1-201ENST00000545989 227 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 MIR6716-201ENST00000613413 80 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 MIR6758-201ENST00000620653 63 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 UCA1.1-201ENST00000620952 75 ntBASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDPF1Q6NVV7 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 AC068647.1-201ENST00000489539 2265 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 Y_RNA.49-201ENST00000362714 112 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RNA5SP447-201ENST00000363749 119 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RNU6-294P-201ENST00000364999 102 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 Y_RNA.366-201ENST00000365540 102 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RNU6-1014P-201ENST00000383940 103 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 MIR548A2-201ENST00000384956 97 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 AL139247.1-201ENST00000422768 325 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RPS12P18-201ENST00000442381 270 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 HMGN2P32-201ENST00000444648 269 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 U3.44-201ENST00000458938 192 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RNU6-693P-201ENST00000516134 107 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 Y_RNA.666-201ENST00000516187 112 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RNU7-99P-201ENST00000516271 62 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 RN7SKP282-201ENST00000516824 299 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 IGLVIV-65-201ENST00000517313 360 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 MIR4425-201ENST00000580572 84 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 AC087685.1-201ENST00000587507 141 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 AC011944.2-201ENST00000624440 683 ntBASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.08□□□□□ -1.92
CDPF1Q6NVV7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 AC018630.2-201ENST00000534866 2403 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 AC092435.3-201ENST00000565538 3654 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 Y_RNA.323-201ENST00000365157 109 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RNU6-1113P-201ENST00000384348 107 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RN7SKP156-201ENST00000410308 342 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 AC060773.1-201ENST00000421698 310 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RPS15AP28-201ENST00000435088 386 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 SNRPGP13-201ENST00000442212 177 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RPS26P48-201ENST00000491713 339 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 AC110768.1-201ENST00000509222 400 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 SCARNA3-201ENST00000517097 143 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 MIR4738-201ENST00000579134 87 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 AC110079.1-202ENST00000635213 138 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 MIR7157-201ENST00000635801 60 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 MIR6830-201ENST00000636015 70 ntBASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDPF1Q6NVV7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 RNU6-1186P-201ENST00000410429 97 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 HMGN2P34-201ENST00000437647 269 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 AC106707.2-201ENST00000484182 374 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 RNA5SP281-201ENST00000516504 135 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 MIR2116-201ENST00000517221 80 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 AL358944.1-201ENST00000528537 144 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 AL589743.1-201ENST00000551932 2712 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 AC007229.1-201ENST00000590455 412 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 U3.53-201ENST00000628922 216 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 IPO8P1-201ENST00000455509 3109 ntBASIC3.06□□□□□ -1.92
CDPF1Q6NVV7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 Y_RNA.198-201ENST00000364013 98 ntBASIC3.05□□□□□ -1.92
CDPF1Q6NVV7 RNA5SP509-201ENST00000364577 119 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms