Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF43Q68DV7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF43Q68DV7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF43Q68DV7 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF43Q68DV7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
RNF43Q68DV7 RNU6-647P-201ENST00000364243 107 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 RNU6-1080P-201ENST00000383982 107 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 U6atac.2-201ENST00000408644 118 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC126124.2-201ENST00000413542 321 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC245291.1-201ENST00000419501 328 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF43Q68DV7 AL161651.1-201ENST00000440882 223 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF43Q68DV7 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 RN7SKP19-201ENST00000516016 252 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 IGKV2-26-201ENST00000518305 343 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC068657.1-201ENST00000520807 306 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC104027.1-201ENST00000521887 300 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC091178.2-201ENST00000584401 117 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AC131055.1-201ENST00000584626 316 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 AP003357.1-201ENST00000604497 148 ntBASIC3.56□□□□□ -1.84
RNF43Q68DV7 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RNF43Q68DV7 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RNF43Q68DV7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF43Q68DV7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF43Q68DV7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF43Q68DV7 OTUD4P1-201ENST00000237841 3067 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 RNU6-309P-201ENST00000364573 106 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 U8.6-201ENST00000364939 135 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 SNORD18B-201ENST00000365659 72 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 RNU6-106P-201ENST00000384405 107 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 SNORD116-13-201ENST00000384408 92 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 AL603914.1-201ENST00000401964 204 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC3.55□□□□□ -1.84
RNF43Q68DV7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF43Q68DV7 AL357552.1-201ENST00000445254 415 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF43Q68DV7 HMGN1P18-201ENST00000457642 277 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 AC090515.1-201ENST00000465295 476 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 SRIP1-201ENST00000489235 288 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 RNU6-1337P-201ENST00000516525 95 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 POLR3GP1-201ENST00000594073 261 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 AL162274.2-201ENST00000614406 332 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 MIR3199-2-201ENST00000636243 86 ntBASIC3.55□□□□□ -1.84
RNF43Q68DV7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF43Q68DV7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF43Q68DV7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.55□□□□□ -1.84
RNF43Q68DV7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF43Q68DV7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF43Q68DV7 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF43Q68DV7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.54□□□□□ -1.84
RNF43Q68DV7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RNF43Q68DV7 AC007496.3-201ENST00000624987 3443 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 RNA5SP383-201ENST00000362934 120 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 SNORD114-19-201ENST00000363072 75 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 Y_RNA.346-201ENST00000365385 112 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 RNU6-484P-201ENST00000384016 107 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 Y_RNA.432-201ENST00000384087 111 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 RNU6-905P-201ENST00000384434 107 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 RNU6-136P-201ENST00000384663 107 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 MIRLET7F2-201ENST00000385277 83 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF43Q68DV7 RN7SKP101-201ENST00000411376 320 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 ARF4P2-201ENST00000430209 526 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 AC145146.1-201ENST00000496370 254 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 SNORA64.4-201ENST00000516632 81 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 AC025166.1-201ENST00000612411 163 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 FAM35BP-202ENST00000497389 3337 ntBASIC3.54□□□□□ -1.84
RNF43Q68DV7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF43Q68DV7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF43Q68DV7 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
RNF43Q68DV7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.54□□□□□ -1.84
RNF43Q68DV7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF43Q68DV7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
RNF43Q68DV7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RNF43Q68DV7 RNU6-294P-201ENST00000364999 102 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 Y_RNA.388-201ENST00000383919 113 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 RNU6-19P-201ENST00000384718 107 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 RNA5SP496-201ENST00000391240 109 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 RNY4P29-201ENST00000410801 97 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.53□□□□□ -1.84
RNF43Q68DV7 RNU6-437P-201ENST00000459408 95 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 RPL23AP54-201ENST00000495129 419 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 AL138880.2-201ENST00000616214 239 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF43Q68DV7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.53□□□□□ -1.84
RNF43Q68DV7 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RNF43Q68DV7 AL021368.2-201ENST00000606125 5352 ntBASIC3.53□□□□□ -1.84
RNF43Q68DV7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
RNF43Q68DV7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
RNF43Q68DV7 MTND5P18-201ENST00000445624 1801 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNA5SP374-201ENST00000362939 125 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNU6-1305P-201ENST00000364353 104 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNU4-41P-201ENST00000364426 143 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNU6-1323P-201ENST00000384025 107 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 SNORA1.3-201ENST00000384676 136 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 SNORA12.1-201ENST00000390873 148 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNU6-554P-201ENST00000410466 106 ntBASIC3.52□□□□□ -1.85
RNF43Q68DV7 RNU2-55P-201ENST00000411146 174 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms