Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF220Q5VTB9 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC2.43□□□□□ -2.02
RNF220Q5VTB9 AC008749.1-201ENST00000597650 306 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 AC022441.3-201ENST00000605737 136 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 U6.115-201ENST00000636045 103 ntBASIC2.43□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.459-201ENST00000384251 102 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC009963.1-201ENST00000417265 157 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 ELOCP20-201ENST00000422460 345 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC105272.1-201ENST00000438604 198 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 SUMO1P2-201ENST00000452524 304 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 SNORD65B-201ENST00000459126 73 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 RNY3P15-201ENST00000516297 97 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 RNA5SP282-201ENST00000516355 108 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 RNU2-12P-201ENST00000517216 168 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC136932.1-201ENST00000574771 208 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 MIR5092-201ENST00000583139 88 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC078899.2-201ENST00000595282 212 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC136443.5-201ENST00000603741 370 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 MIR376A1-201ENST00000616574 68 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 AC012640.5-201ENST00000623897 319 ntBASIC2.42□□□□□ -2.02
RNF220Q5VTB9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.243-201ENST00000364481 109 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.446-201ENST00000384178 104 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 MIR597-201ENST00000384968 97 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 AC107083.1-201ENST00000439643 279 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 RNU7-110P-201ENST00000516891 62 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 MIR4300-201ENST00000581016 96 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 AL353149.1-201ENST00000610667 244 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 AC006435.5-201ENST00000624486 112 ntBASIC2.41□□□□□ -2.02
RNF220Q5VTB9 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RNF220Q5VTB9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RNF220Q5VTB9 AC007336.1-201ENST00000576365 3828 ntBASIC2.4□□□□□ -2.02
RNF220Q5VTB9 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
RNF220Q5VTB9 Y_RNA.19-201ENST00000362462 99 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 snoU2-30.2-201ENST00000362805 70 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 RNU6-21P-201ENST00000384710 107 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 SNORD115-46-201ENST00000390982 71 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 RPL21P1-201ENST00000399532 476 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF220Q5VTB9 HMGN2P34-201ENST00000437647 269 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 AC005042.3-201ENST00000453230 174 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.4□□□□□ -2.03
RNF220Q5VTB9 SEPT14P8-201ENST00000508026 178 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 RNU6-155P-201ENST00000516347 100 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 RNU2-19P-201ENST00000517288 84 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 AC006023.1-201ENST00000603944 259 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 PRR13P7-201ENST00000605538 430 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 MIR338-201ENST00000636369 67 ntBASIC2.4□□□□□ -2.03
RNF220Q5VTB9 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RNF220Q5VTB9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF220Q5VTB9 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
RNF220Q5VTB9 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
RNF220Q5VTB9 RNU6-1109P-201ENST00000391187 107 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.39□□□□□ -2.03
RNF220Q5VTB9 AL731563.1-201ENST00000442202 214 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 MTATP8P1-201ENST00000467115 207 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.39□□□□□ -2.03
RNF220Q5VTB9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.39□□□□□ -2.03
RNF220Q5VTB9 ELOCP29-201ENST00000588193 334 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 SNORD113-5-201ENST00000607261 78 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.39□□□□□ -2.03
RNF220Q5VTB9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RNF220Q5VTB9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 Y_RNA.331-201ENST00000365267 102 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 SNORA20B-201ENST00000384220 132 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 RNU6-417P-201ENST00000384712 107 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 MIR128-1-201ENST00000384921 82 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 SNORA11.4-201ENST00000408823 129 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 RNA5SP450-201ENST00000411206 102 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 RNU6-1199P-201ENST00000411249 104 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 MTND2P29-201ENST00000438595 412 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 LINC01399-202ENST00000458450 244 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AC055731.1-201ENST00000474387 401 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AC079804.2-201ENST00000490376 200 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 YWHAEP4-201ENST00000505390 198 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AC025465.3-201ENST00000510570 311 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AL117187.1-201ENST00000555482 181 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AL137100.2-201ENST00000555786 315 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AC007229.1-201ENST00000590455 412 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 AC005828.6-201ENST00000606610 232 ntBASIC2.38□□□□□ -2.03
RNF220Q5VTB9 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms