Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RC3H1Q5TC82 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RC3H1Q5TC82 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RC3H1Q5TC82 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RC3H1Q5TC82 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RC3H1Q5TC82 TNPO1P3-201ENST00000436471 2662 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.32□□□□□ -1.72
RC3H1Q5TC82 AC010733.2-201ENST00000589496 5702 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 AL356292.1-201ENST00000283110 373 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 RNU6-1010P-201ENST00000362757 107 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 RNU6-1152P-201ENST00000384576 107 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 SNORD78.1-201ENST00000390866 65 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 RPS3P1-201ENST00000456781 192 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 SNRPGP3-201ENST00000469405 227 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 AC084357.1-201ENST00000473404 255 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 AC083906.5-201ENST00000503722 328 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.32□□□□□ -1.72
RC3H1Q5TC82 RNU6ATAC17P-201ENST00000516074 71 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 MIR2114-201ENST00000516645 80 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 RNU6-928P-201ENST00000516876 104 ntBASIC4.32□□□□□ -1.72
RC3H1Q5TC82 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.32□□□□□ -1.72
RC3H1Q5TC82 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AL590004.2-201ENST00000404787 371 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC023449.1-201ENST00000454464 154 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC006445.1-201ENST00000491925 405 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 HSPE1P18-201ENST00000517602 280 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AL365205.2-201ENST00000594586 68 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC020914.4-201ENST00000597690 277 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC110741.2-201ENST00000605278 268 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 RNU6-91P-201ENST00000607774 107 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC006386.2-201ENST00000624491 75 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC012005.1-201ENST00000624575 75 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 CEP170P1-201ENST00000502249 4587 ntBASIC4.31□□□□□ -1.72
RC3H1Q5TC82 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RC3H1Q5TC82 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 Y_RNA.219-201ENST00000364232 113 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 Z98941.1-201ENST00000407764 100 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 AC002075.2-201ENST00000425207 252 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 AC021205.2-201ENST00000480069 347 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 COX6CP6-201ENST00000490840 228 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 RNU6-365P-201ENST00000517113 106 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 HNRNPDLP4-201ENST00000605144 301 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 AC103988.1-201ENST00000566382 2177 ntBASIC4.3□□□□□ -1.72
RC3H1Q5TC82 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RC3H1Q5TC82 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 ANKRD20A9P-201ENST00000457997 2978 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 AL589743.1-201ENST00000551932 2712 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 MIR422A-201ENST00000362286 90 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 SNORA63.5-201ENST00000363548 123 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 RNU6-1146P-201ENST00000516282 102 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 RNU6-109P-201ENST00000516364 107 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 RNU6-184P-201ENST00000516514 107 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 AC026333.2-201ENST00000542164 106 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 AL033523.1-201ENST00000605153 153 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 RPL17P51-201ENST00000605218 238 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 AL035470.1-201ENST00000622571 220 ntBASIC4.29□□□□□ -1.72
RC3H1Q5TC82 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
RC3H1Q5TC82 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 SNORA51.4-201ENST00000364993 124 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 RNU6-748P-201ENST00000384648 107 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 AL139095.1-201ENST00000404326 391 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 RNU2-32P-201ENST00000411193 191 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 AC010598.1-201ENST00000510378 103 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 RNA5SP236-201ENST00000516169 116 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 RNU6-63P-201ENST00000516690 95 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 RPL23AP91-201ENST00000569211 455 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 MIR2681-201ENST00000581814 105 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 AC134878.1-201ENST00000619901 243 ntBASIC4.28□□□□□ -1.72
RC3H1Q5TC82 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
RC3H1Q5TC82 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms