Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 AC091179.3-201ENST00000474761 144 ntBASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 RRN3P3-201ENST00000549207 578 ntBASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 AC105245.1-201ENST00000581934 244 ntBASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
TTC39AQ5SRH9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.439-201ENST00000384119 94 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 RNU6-1145P-201ENST00000384246 107 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 RNU6-611P-201ENST00000384276 104 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC004386.2-201ENST00000441858 148 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 LINC01399-202ENST00000458450 244 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC098869.1-201ENST00000481627 292 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 RN7SKP49-201ENST00000516675 260 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 MIR3149-201ENST00000584629 83 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 SNORD14A-201ENST00000606526 91 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC010205.1-201ENST00000616668 449 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC005562.2-201ENST00000618264 111 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC130454.1-201ENST00000622948 401 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 AC012640.5-201ENST00000623897 319 ntBASIC2.45□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.179-201ENST00000363844 90 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.183-201ENST00000363882 113 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.276-201ENST00000364732 109 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 RNU6-937P-201ENST00000384325 106 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 AL355497.1-201ENST00000406262 551 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 U6atac.2-201ENST00000408644 118 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 RPL21P38-201ENST00000418090 167 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 AL731563.1-201ENST00000442202 214 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 PCNPP5-201ENST00000452246 481 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 SNORA40.9-201ENST00000515895 93 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 AC136932.1-201ENST00000574771 208 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 MIR5694-201ENST00000581190 76 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 MIR5006-201ENST00000583027 110 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 SNRPGP20-201ENST00000604477 205 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.772-201ENST00000606692 102 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 AC069294.1-201ENST00000608397 350 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 MTND5P35-201ENST00000557537 1720 ntBASIC2.44□□□□□ -2.02
TTC39AQ5SRH9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-961P-201ENST00000363893 105 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.193-201ENST00000363979 102 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 SNORA3A-201ENST00000364113 130 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 SNORD32B-201ENST00000364460 84 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNA5SP160-201ENST00000364866 120 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.396-201ENST00000383949 103 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-245P-201ENST00000384020 107 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-793P-201ENST00000384233 104 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-713P-201ENST00000384761 107 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 MIR29B2-201ENST00000385055 81 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 AL033519.2-201ENST00000403958 392 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 MIR1302-3-201ENST00000408128 138 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 MIR1289-2-201ENST00000408360 111 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.595-201ENST00000410403 105 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 AL021397.1-201ENST00000451806 248 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 snoU13.23-201ENST00000458863 104 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-408P-201ENST00000515910 100 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.683-201ENST00000516508 93 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU2-44P-201ENST00000516795 194 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-570P-201ENST00000517051 105 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 RNU6-586P-201ENST00000517265 104 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 AL161670.1-201ENST00000554348 137 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 DEFB122-202ENST00000569013 197 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 SNRPGP19-201ENST00000603826 189 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 U4.1-201ENST00000620349 87 ntBASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 NAA50-211ENST00000630058 177 ntTSL 5 BASIC2.43□□□□□ -2.02
TTC39AQ5SRH9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 Y_RNA.452-201ENST00000384202 108 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 MIR215-201ENST00000384858 110 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 SNORD23.1-201ENST00000408212 104 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 RPL26P26-201ENST00000480251 434 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 AP003733.2-201ENST00000529409 171 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 MIR5089-201ENST00000580047 84 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 MIR4300-201ENST00000581016 96 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 MIR8062-201ENST00000621515 85 ntBASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
TTC39AQ5SRH9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
TTC39AQ5SRH9 SNORD87-201ENST00000364849 89 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms