Protein–RNA interactions for Protein: Q13133

NR1H3, Oxysterols receptor LXR-alpha, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3Q13133 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NR1H3Q13133 Y_RNA.634-201ENST00000364811 113 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
NR1H3Q13133 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H3Q13133 U6atac.2-201ENST00000408644 118 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 RNU2-32P-201ENST00000411193 191 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 AC126124.2-201ENST00000413542 321 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 RPS29P4-201ENST00000414733 161 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 AC063976.3-201ENST00000426849 329 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 AL158147.1-201ENST00000443970 75 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 AC245102.2-201ENST00000448956 180 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 TRBV12-2-201ENST00000489763 344 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 SCARNA14-201ENST00000516903 136 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 Y_RNA.709-201ENST00000516952 92 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 SCARNA3-201ENST00000517097 143 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 CYCSP26-201ENST00000534107 320 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.93□□□□□ -1.78
NR1H3Q13133 AC244505.7-201ENST00000599675 272 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 U3.45-201ENST00000607547 219 ntBASIC3.93□□□□□ -1.78
NR1H3Q13133 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.93□□□□□ -1.78
NR1H3Q13133 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NR1H3Q13133 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
NR1H3Q13133 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
NR1H3Q13133 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NR1H3Q13133 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1H3Q13133 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H3Q13133 Y_RNA.91-201ENST00000363042 107 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 Y_RNA.111-201ENST00000363248 100 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 MIR1253-201ENST00000408273 105 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 MLLT10P1-201ENST00000418346 262 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 MICF-203ENST00000432679 129 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 RPL39P40-201ENST00000445481 146 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 PRSS3P4-201ENST00000453323 162 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1H3Q13133 CKS1BP2-201ENST00000497342 240 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 CYCTP-201ENST00000504253 315 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 SNORA4.4-201ENST00000515921 135 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 RNU6-126P-201ENST00000516685 103 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 AC011604.1-201ENST00000545978 196 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 MIR3121-201ENST00000579680 77 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 AC105245.1-201ENST00000581934 244 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 MIR3199-1-201ENST00000582434 88 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 RNVU1-4-201ENST00000612985 164 ntBASIC3.92□□□□□ -1.78
NR1H3Q13133 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
NR1H3Q13133 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H3Q13133 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H3Q13133 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H3Q13133 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.92□□□□□ -1.78
NR1H3Q13133 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H3Q13133 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.92□□□□□ -1.78
NR1H3Q13133 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
NR1H3Q13133 AC080128.1-201ENST00000474389 1917 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H3Q13133 RNU6-1209P-201ENST00000363655 107 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 RNU6-743P-201ENST00000364151 106 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 RNA5SP387-201ENST00000364226 106 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 Y_RNA.333-201ENST00000365274 102 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
NR1H3Q13133 AC002075.2-201ENST00000425207 252 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 AC009969.1-201ENST00000438726 172 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 SNORD11-201ENST00000459124 84 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 AC106707.2-201ENST00000484182 374 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 RNU5E-3P-201ENST00000515913 68 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 RNU6-1061P-201ENST00000516530 99 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 AC097639.2-201ENST00000603159 172 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 MIR5739-201ENST00000619803 80 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 MIR7515-201ENST00000637837 67 ntBASIC3.91□□□□□ -1.78
NR1H3Q13133 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H3Q13133 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H3Q13133 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NR1H3Q13133 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H3Q13133 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H3Q13133 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NR1H3Q13133 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.9□□□□□ -1.78
NR1H3Q13133 MIR208A-201ENST00000362287 71 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 Y_RNA.114-201ENST00000363265 113 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 Y_RNA.796-201ENST00000364268 102 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 Y_RNA.799-201ENST00000364992 102 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NR1H3Q13133 AC093578.1-201ENST00000415219 368 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 AC110768.1-201ENST00000509222 400 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 PHBP14-201ENST00000512887 367 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H3Q13133 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.9□□□□□ -1.79
NR1H3Q13133 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.9□□□□□ -1.79
NR1H3Q13133 MIR4662B-201ENST00000579498 81 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 AL137849.1-201ENST00000604767 169 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 JPX_2.1-201ENST00000614161 69 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 Pinc.1-201ENST00000616452 154 ntBASIC3.9□□□□□ -1.79
NR1H3Q13133 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.9□□□□□ -1.79
NR1H3Q13133 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NR1H3Q13133 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
NR1H3Q13133 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.9□□□□□ -1.79
NR1H3Q13133 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR1H3Q13133 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.89□□□□□ -1.79
NR1H3Q13133 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NR1H3Q13133 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
NR1H3Q13133 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.89□□□□□ -1.79
NR1H3Q13133 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms