Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RNU4-10P-201ENST00000364383 140 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU6-283P-201ENST00000364788 107 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU4-17P-201ENST00000365598 141 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU6-1235P-201ENST00000384559 107 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 MIR561-201ENST00000385216 97 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU2-2P-201ENST00000410396 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU6-498P-201ENST00000459468 107 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 S100A11P2-201ENST00000467589 312 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC12P31275 RNU6-1337P-201ENST00000516525 95 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 SNORA48.11-201ENST00000517015 89 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 AC025647.1-201ENST00000517879 253 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 SUMO2P18-201ENST00000518873 252 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 AC021269.2-201ENST00000532318 330 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 MIR3117-201ENST00000584034 78 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU2-4P-201ENST00000606190 192 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.15-201ENST00000611544 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.16-201ENST00000613119 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.12-201ENST00000613778 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.9-201ENST00000615427 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.11-201ENST00000616345 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.2-201ENST00000616535 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.3-201ENST00000617785 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.19-201ENST00000618602 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 RNU2-1-201ENST00000618664 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.6-201ENST00000619225 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.5-201ENST00000619465 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 U2.10-201ENST00000620268 191 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HOXC12P31275 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.02□□□□□ -1.93
HOXC12P31275 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HOXC12P31275 AC068647.1-201ENST00000489539 2265 ntBASIC3.02□□□□□ -1.93
HOXC12P31275 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HOXC12P31275 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC12P31275 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC12P31275 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC12P31275 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXC12P31275 RNU6-461P-201ENST00000364195 107 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 Y_RNA.238-201ENST00000364441 102 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 SNORD17-201ENST00000390930 237 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC12P31275 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.01□□□□□ -1.93
HOXC12P31275 AL137159.1-201ENST00000452808 512 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 AC006539.3-201ENST00000454258 129 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXC12P31275 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.01□□□□□ -1.93
HOXC12P31275 RNU6-991P-201ENST00000516168 107 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 RPPH1-2P-201ENST00000516688 293 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 RNU6-1212P-201ENST00000517023 104 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 AC100767.1-201ENST00000528178 123 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 LARP7P3-201ENST00000579888 337 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
HOXC12P31275 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HOXC12P31275 AC009487.4-201ENST00000624969 3585 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 AL035425.3-201ENST00000564206 4996 ntBASIC3.01□□□□□ -1.93
HOXC12P31275 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HOXC12P31275 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC12P31275 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3□□□□□ -1.93
HOXC12P31275 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HOXC12P31275 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3□□□□□ -1.93
HOXC12P31275 RNU6-1240P-201ENST00000365155 104 ntBASIC3□□□□□ -1.93
HOXC12P31275 RNU6-746P-201ENST00000384112 109 ntBASIC3□□□□□ -1.93
HOXC12P31275 RN7SKP123-201ENST00000410732 291 ntBASIC3□□□□□ -1.93
HOXC12P31275 AC008134.1-201ENST00000420943 193 ntBASIC3□□□□□ -1.93
HOXC12P31275 AC010531.2-201ENST00000465012 153 ntBASIC3□□□□□ -1.93
HOXC12P31275 AC093259.1-201ENST00000509755 300 ntBASIC3□□□□□ -1.93
HOXC12P31275 RNA5SP20-201ENST00000515976 84 ntBASIC3□□□□□ -1.93
HOXC12P31275 VTRNA2-2P-201ENST00000516091 103 ntBASIC3□□□□□ -1.93
HOXC12P31275 MIR5680-201ENST00000577577 84 ntBASIC3□□□□□ -1.93
HOXC12P31275 MIR4276-201ENST00000584832 70 ntBASIC3□□□□□ -1.93
HOXC12P31275 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3□□□□□ -1.93
HOXC12P31275 AC104465.1-201ENST00000611365 139 ntBASIC3□□□□□ -1.93
HOXC12P31275 AC021753.1-201ENST00000635724 168 ntBASIC3□□□□□ -1.93
HOXC12P31275 AC068647.2-201ENST00000637380 353 ntBASIC3□□□□□ -1.93
HOXC12P31275 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3□□□□□ -1.93
HOXC12P31275 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3□□□□□ -1.93
HOXC12P31275 AC068700.1-201ENST00000565862 3754 ntBASIC3□□□□□ -1.93
HOXC12P31275 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3□□□□□ -1.93
HOXC12P31275 AC009487.2-201ENST00000420969 6821 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 Y_RNA.8-201ENST00000362353 102 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 RNA5SP374-201ENST00000362939 125 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 RNU6-1205P-201ENST00000363625 106 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 U8.7-201ENST00000364940 136 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
HOXC12P31275 RNU1-109P-201ENST00000383960 147 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 SNORA8.3-201ENST00000384679 139 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 MIR518C-201ENST00000384822 101 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AL355497.1-201ENST00000406262 551 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC123900.1-201ENST00000420390 96 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 COTL1P1-201ENST00000422309 375 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC092427.1-202ENST00000430569 476 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 HSPE1P13-201ENST00000451143 297 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 EEF1B2P7-201ENST00000451177 676 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC091021.1-201ENST00000468051 388 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 RPS26P55-201ENST00000471178 356 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC117454.1-201ENST00000491120 168 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 RN7SL504P-201ENST00000494496 287 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 RNU2-34P-201ENST00000516534 121 ntBASIC2.99□□□□□ -1.93
HOXC12P31275 AC026333.2-201ENST00000542164 106 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms