Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RNU6-237P-201ENST00000515985 71 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RNA5SP182-201ENST00000516064 82 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 SNORA25.14-201ENST00000516481 132 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 RNU1-117P-201ENST00000517041 158 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 DEFB131C-201ENST00000528817 165 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 AL442663.2-201ENST00000554385 511 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 AC005034.5-201ENST00000604219 466 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 AL162373.1-201ENST00000620433 407 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 MTND5P16-201ENST00000460269 1703 ntBASIC2.14□□□□□ -2.07
HOXA13P31271 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HOXA13P31271 AC005592.1-201ENST00000566527 1640 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 RNA5SP361-201ENST00000362686 118 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 RNU1-76P-201ENST00000362903 159 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 RNU6-23P-201ENST00000363283 107 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 Y_RNA.153-201ENST00000363615 91 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 SNORD31B-201ENST00000364977 69 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 RNU6-639P-201ENST00000384074 107 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 Y_RNA.557-201ENST00000384680 107 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 MIR9-3-201ENST00000385084 90 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 AC007098.1-201ENST00000420122 367 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 AC139712.2-201ENST00000424302 339 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 AC007215.1-201ENST00000464893 276 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 AC090255.1-201ENST00000495779 349 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.13□□□□□ -2.07
HOXA13P31271 RNU6-58P-201ENST00000517143 103 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.13□□□□□ -2.07
HOXA13P31271 MIR4753-201ENST00000585119 83 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 AC125232.2-201ENST00000592457 143 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 AC100812.1-201ENST00000607622 580 ntBASIC2.13□□□□□ -2.07
HOXA13P31271 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
HOXA13P31271 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
HOXA13P31271 Y_RNA.158-201ENST00000363651 101 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 MIR625-201ENST00000385047 85 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 SNORA69.1-201ENST00000390904 137 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 RNA5SP213-201ENST00000391031 106 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HOXA13P31271 AC004866.1-201ENST00000411748 78 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.12□□□□□ -2.07
HOXA13P31271 AC123900.1-201ENST00000420390 96 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 SNORA25.10-201ENST00000515926 124 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 RNU6-548P-201ENST00000517083 115 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.12□□□□□ -2.07
HOXA13P31271 AC006504.6-201ENST00000590142 199 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 AC008737.2-201ENST00000599446 118 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.12□□□□□ -2.07
HOXA13P31271 U2.1-201ENST00000618978 145 ntBASIC2.12□□□□□ -2.07
HOXA13P31271 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HOXA13P31271 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
HOXA13P31271 BX322639.1-202ENST00000423987 2213 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXA13P31271 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 Y_RNA.39-201ENST00000362620 98 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 RNU6-1305P-201ENST00000364353 104 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 MIR597-201ENST00000384968 97 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 MIR10B-201ENST00000385011 110 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 RNU6-823P-201ENST00000391042 103 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 Y_RNA.605-201ENST00000410577 105 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 RNU6-1001P-201ENST00000411265 100 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AC009237.7-201ENST00000447357 229 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 U8.20-201ENST00000459445 131 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AC055731.1-201ENST00000474387 401 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AC010469.2-201ENST00000496412 480 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 RNU2-19P-201ENST00000517288 84 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 RRN3P3-201ENST00000549207 578 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 HSBP1P1-201ENST00000555205 166 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AC113195.1-201ENST00000579952 141 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 MIR8081-201ENST00000611533 95 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 PART1_1.1-201ENST00000611761 217 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AL590240.4-201ENST00000616908 390 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AL078596.1-201ENST00000624856 447 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.11□□□□□ -2.07
HOXA13P31271 AP000553.5-201ENST00000641933 54 ntBASIC2.11□□□□□ -2.07
HOXA13P31271 LINC02555-201ENST00000563933 1951 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HOXA13P31271 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HOXA13P31271 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
HOXA13P31271 RNU1-58P-201ENST00000362413 163 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 RNU6-873P-201ENST00000363833 107 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 RNU6-1164P-201ENST00000364428 107 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 Y_RNA.332-201ENST00000365271 113 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 RNU6-318P-201ENST00000384283 103 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 MIR300-201ENST00000401138 83 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 AL033519.2-201ENST00000403958 392 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 RNU6-985P-201ENST00000410182 104 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 RNU6-764P-201ENST00000516396 105 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 RNU7-4P-201ENST00000516961 62 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 MIR4287-201ENST00000579398 78 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 MIR5695-201ENST00000579717 85 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 AC136443.5-201ENST00000603741 370 ntBASIC2.1□□□□□ -2.07
HOXA13P31271 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HOXA13P31271 AL596028.1-201ENST00000326971 197 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 Y_RNA.26-201ENST00000362539 101 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 RNU6-727P-201ENST00000363592 107 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 RNU6-280P-201ENST00000364145 104 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 RNA5SP138-201ENST00000365098 114 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.09□□□□□ -2.07
HOXA13P31271 RNU6-418P-201ENST00000384035 107 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 Y_RNA.512-201ENST00000384518 102 ntBASIC2.09□□□□□ -2.07
HOXA13P31271 MIR1283-1-201ENST00000408494 87 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms