Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.87□□□□□ -1.95
CNGA1P29973 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CNGA1P29973 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CNGA1P29973 RNU6-1164P-201ENST00000364428 107 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 RNU6-1310P-201ENST00000384153 107 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 Y_RNA.459-201ENST00000384251 102 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 RNU6-160P-201ENST00000384591 107 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 MIR29C-201ENST00000385231 88 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 RPL21P1-201ENST00000399532 476 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 AC007064.1-201ENST00000412238 351 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 ELOCP20-201ENST00000422460 345 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.86□□□□□ -1.95
CNGA1P29973 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.86□□□□□ -1.95
CNGA1P29973 RNU6-856P-201ENST00000516959 98 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 AL117187.1-201ENST00000555482 181 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 AC136932.1-201ENST00000574771 208 ntBASIC2.86□□□□□ -1.95
CNGA1P29973 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.86□□□□□ -1.95
CNGA1P29973 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.86□□□□□ -1.95
CNGA1P29973 Y_RNA.214-201ENST00000364201 112 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 MIR518C-201ENST00000384822 101 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 RN7SKP223-201ENST00000410582 62 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 RNU6-57P-201ENST00000411348 103 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.85□□□□□ -1.95
CNGA1P29973 AL358176.2-201ENST00000425769 204 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.85□□□□□ -1.95
CNGA1P29973 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.85□□□□□ -1.95
CNGA1P29973 RNU1-131P-201ENST00000458943 161 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.85□□□□□ -1.95
CNGA1P29973 AC005176.2-201ENST00000596933 147 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 AC005034.5-201ENST00000604219 466 ntBASIC2.85□□□□□ -1.95
CNGA1P29973 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.85□□□□□ -1.95
CNGA1P29973 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.85□□□□□ -1.95
CNGA1P29973 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.85□□□□□ -1.95
CNGA1P29973 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CNGA1P29973 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.84□□□□□ -1.95
CNGA1P29973 Y_RNA.143-201ENST00000363520 106 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 SNORA3A-201ENST00000364113 130 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 RNU6-454P-201ENST00000364292 107 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 SNORD114-6-201ENST00000364393 72 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 SNORD63-201ENST00000384262 68 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 Y_RNA.570-201ENST00000384750 101 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 MIR1289-2-201ENST00000408360 111 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 RNA5SP475-201ENST00000410568 110 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.84□□□□□ -1.95
CNGA1P29973 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.84□□□□□ -1.95
CNGA1P29973 MTATP8P1-201ENST00000467115 207 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.84□□□□□ -1.95
CNGA1P29973 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.84□□□□□ -1.95
CNGA1P29973 PRR13P7-201ENST00000605538 430 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 AC130454.1-201ENST00000622948 401 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 AC091932.3-201ENST00000624223 323 ntBASIC2.84□□□□□ -1.95
CNGA1P29973 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.84□□□□□ -1.95
CNGA1P29973 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CNGA1P29973 RNU6-937P-201ENST00000384325 106 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 AL591806.2-201ENST00000433122 173 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 snoU13.23-201ENST00000458863 104 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 AC025465.3-201ENST00000510570 311 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 SNORA40.15-201ENST00000516884 107 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 AC015712.3-201ENST00000559380 164 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 AC004467.1-201ENST00000615678 330 ntBASIC2.83□□□□□ -1.96
CNGA1P29973 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.83□□□□□ -1.96
CNGA1P29973 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CNGA1P29973 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
CNGA1P29973 Y_RNA.105-201ENST00000363182 111 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 RNU6-770P-201ENST00000363929 105 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 RNU6-1105P-201ENST00000384774 107 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 HMGN2P39-201ENST00000398005 273 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 RNU5A-5P-201ENST00000411054 116 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.82□□□□□ -1.96
CNGA1P29973 CR769767.1-201ENST00000436337 346 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 AL139109.1-201ENST00000455491 297 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 AC108210.2-201ENST00000503681 201 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 AC025647.1-201ENST00000517879 253 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.82□□□□□ -1.96
CNGA1P29973 MIR4300-201ENST00000581016 96 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.82□□□□□ -1.96
CNGA1P29973 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.82□□□□□ -1.96
CNGA1P29973 MIR376A1-201ENST00000616574 68 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 AL590240.4-201ENST00000616908 390 ntBASIC2.82□□□□□ -1.96
CNGA1P29973 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
CNGA1P29973 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
CNGA1P29973 ZNF271P-202ENST00000465539 1970 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CNGA1P29973 Y_RNA.101-201ENST00000363154 102 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 SNORA72.2-201ENST00000365028 127 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 DEFA7P-201ENST00000382676 285 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 SNORA40.19-201ENST00000390846 128 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 SNORD115-46-201ENST00000390982 71 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 RNA5SP210-201ENST00000391034 120 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 RNU6-1109P-201ENST00000391187 107 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 RNU6-121P-201ENST00000410525 99 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC016909.1-201ENST00000415916 166 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.81□□□□□ -1.96
CNGA1P29973 AL390729.2-201ENST00000416137 156 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC008134.1-201ENST00000420943 193 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.81□□□□□ -1.96
CNGA1P29973 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.81□□□□□ -1.96
CNGA1P29973 AC234781.5-201ENST00000508429 271 ntBASIC2.81□□□□□ -1.96
CNGA1P29973 RNU6-1143P-201ENST00000516125 104 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms