Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RNA5SP356-201ENST00000515972 94 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 SNORA70.12-201ENST00000516084 153 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 SNORA27.4-201ENST00000516650 95 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 GTF3AP2-201ENST00000557014 266 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC3.5□□□□□ -1.85
ERCC3P19447 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC3.5□□□□□ -1.85
ERCC3P19447 AC005828.6-201ENST00000606610 232 ntBASIC3.5□□□□□ -1.85
ERCC3P19447 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.5□□□□□ -1.85
ERCC3P19447 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ERCC3P19447 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ERCC3P19447 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.49□□□□□ -1.85
ERCC3P19447 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
ERCC3P19447 Y_RNA.332-201ENST00000365271 113 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.49□□□□□ -1.85
ERCC3P19447 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.49□□□□□ -1.85
ERCC3P19447 AL135938.1-201ENST00000443141 297 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 SNORD65B-201ENST00000459126 73 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 RNU6-191P-201ENST00000516295 94 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 RNU2-34P-201ENST00000516534 121 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 MIR3126-201ENST00000577443 74 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 MIR3684-201ENST00000579779 74 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 AL162424.1-201ENST00000602325 221 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 AL035425.3-201ENST00000564206 4996 ntBASIC3.49□□□□□ -1.85
ERCC3P19447 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
ERCC3P19447 Y_RNA.269-201ENST00000364685 89 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 RNU6-1240P-201ENST00000365155 104 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 SNORA20B-201ENST00000384220 132 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 Y_RNA.539-201ENST00000384635 107 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 RNU6-855P-201ENST00000410395 104 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 SRIP3-201ENST00000413200 219 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.48□□□□□ -1.85
ERCC3P19447 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.48□□□□□ -1.85
ERCC3P19447 AC025647.1-201ENST00000517879 253 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.48□□□□□ -1.85
ERCC3P19447 AC026271.5-201ENST00000577873 130 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 AC141273.2-201ENST00000618989 130 ntBASIC3.48□□□□□ -1.85
ERCC3P19447 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ERCC3P19447 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.48□□□□□ -1.85
ERCC3P19447 RNU6-1289P-201ENST00000384431 106 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 RNU6-1072P-201ENST00000384703 107 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 RNU6-443P-201ENST00000384780 107 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 RNU6-710P-201ENST00000410424 105 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 AL121890.1-201ENST00000435457 205 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 AL357134.1-201ENST00000445848 426 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 RN7SL499P-201ENST00000481141 276 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 AC010409.1-201ENST00000487382 476 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 RNA5SP367-201ENST00000516557 118 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 RNU6-794P-201ENST00000517261 64 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC3.47□□□□□ -1.85
ERCC3P19447 AC090115.4-201ENST00000609970 188 ntBASIC3.47□□□□□ -1.85
ERCC3P19447 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ERCC3P19447 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ERCC3P19447 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ERCC3P19447 Y_RNA.275-201ENST00000364726 110 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 AL355796.1-201ENST00000406706 323 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 RNU2-61P-201ENST00000411069 191 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 HMGN2P34-201ENST00000437647 269 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 RPS27P22-201ENST00000478056 241 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.46□□□□□ -1.86
ERCC3P19447 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC3.46□□□□□ -1.86
ERCC3P19447 AC010598.1-201ENST00000510378 103 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 RN7SKP132-201ENST00000516001 208 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.46□□□□□ -1.86
ERCC3P19447 MIR4643-201ENST00000577473 78 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 MIR4658-201ENST00000584344 65 ntBASIC3.46□□□□□ -1.86
ERCC3P19447 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
ERCC3P19447 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.46□□□□□ -1.86
ERCC3P19447 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.46□□□□□ -1.86
ERCC3P19447 AC093831.2-201ENST00000624393 3427 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 AL159152.1-201ENST00000635019 2587 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 Y_RNA.124-201ENST00000363339 93 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 BTF3P11-201ENST00000426582 477 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 MTCO1P44-201ENST00000441935 243 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 AC245102.2-201ENST00000448956 180 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 SUMO1P2-201ENST00000452524 304 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.45□□□□□ -1.86
ERCC3P19447 RNA5SP217-201ENST00000515959 91 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 NDUFA5P6-201ENST00000542110 379 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 ELOCP29-201ENST00000588193 334 ntBASIC3.45□□□□□ -1.86
ERCC3P19447 AC073325.2-201ENST00000339545 159 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 MIR449A-201ENST00000362113 91 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 VTRNA1-1-201ENST00000363120 99 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 RNU6-271P-201ENST00000363858 105 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 MIR1262-201ENST00000408276 93 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 SCGB1D5P-201ENST00000515134 247 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 MIR3162-201ENST00000581818 82 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
ERCC3P19447 AC022202.1-201ENST00000613515 211 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 AC073476.4-201ENST00000628409 72 ntBASIC3.44□□□□□ -1.86
ERCC3P19447 AC009487.4-201ENST00000624969 3585 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 Y_RNA.99-201ENST00000363138 105 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 Y_RNA.341-201ENST00000365341 102 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 RNU6-160P-201ENST00000384591 107 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 RNU6-651P-201ENST00000411040 105 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 EDDM3CP-201ENST00000415977 425 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.43□□□□□ -1.86
ERCC3P19447 AC105272.1-201ENST00000438604 198 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 RN7SL429P-201ENST00000479090 223 ntBASIC3.43□□□□□ -1.86
ERCC3P19447 RN7SL489P-201ENST00000486185 223 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms