Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.18□□□□□ -2.22
MRPL3P09001 SUB1P3-201ENST00000564581 315 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 SUB1P4-201ENST00000566062 339 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 FRG2DP-202ENST00000566967 323 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 MIR4753-201ENST00000585119 83 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
MRPL3P09001 AC083806.3-201ENST00000614016 455 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 AL357075.2-201ENST00000614906 189 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 MTND4LP32-201ENST00000636111 270 ntBASIC1.18□□□□□ -2.22
MRPL3P09001 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
MRPL3P09001 RNU6-862P-201ENST00000362804 105 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 RNU6-890P-201ENST00000384121 107 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 RNU6-541P-201ENST00000384709 110 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 RNU6-1001P-201ENST00000411265 100 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.17□□□□□ -2.22
MRPL3P09001 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 OOSP1P1-201ENST00000423265 274 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 EIF1P2-201ENST00000428233 350 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC010095.1-201ENST00000443543 144 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 HSPE1P24-201ENST00000450782 238 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.17□□□□□ -2.22
MRPL3P09001 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.17□□□□□ -2.22
MRPL3P09001 RNU6-559P-201ENST00000516151 98 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.17□□□□□ -2.22
MRPL3P09001 DNAJC19P9-201ENST00000555084 351 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 MIR5695-201ENST00000579717 85 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 MIR548S-201ENST00000581352 82 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC005786.1-201ENST00000588553 154 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC113139.1-201ENST00000605049 239 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 PRR13P7-201ENST00000605538 430 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.17□□□□□ -2.22
MRPL3P09001 AC100812.1-201ENST00000607622 580 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 SNORD11B-201ENST00000607707 90 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 MIR1244-1-201ENST00000612829 85 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC025253.1-201ENST00000613623 543 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC104260.1-201ENST00000616660 539 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 MIR1244-3-201ENST00000635744 85 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 AC068205.3-201ENST00000636385 468 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 MIR1244-2-201ENST00000636449 85 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 MIR1244-4-202ENST00000636813 85 ntBASIC1.17□□□□□ -2.22
MRPL3P09001 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.17□□□□□ -2.22
MRPL3P09001 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MRPL3P09001 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
MRPL3P09001 RNA5SP361-201ENST00000362686 118 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-99P-201ENST00000364721 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-1235P-201ENST00000384559 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 Y_RNA.529-201ENST00000384586 119 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-296P-201ENST00000384608 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 Y_RNA.557-201ENST00000384680 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 MIR329-1-201ENST00000385028 80 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-57P-201ENST00000411348 103 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.16□□□□□ -2.22
MRPL3P09001 MRPS18CP6-201ENST00000423587 223 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.16□□□□□ -2.22
MRPL3P09001 USP9YP16-201ENST00000430287 407 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC245047.4-201ENST00000433189 144 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC1.16□□□□□ -2.22
MRPL3P09001 ATP5J2P3-201ENST00000451550 258 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 USP9YP23-201ENST00000455085 407 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU1-123P-201ENST00000458950 160 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-498P-201ENST00000459468 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU7-57P-201ENST00000459540 60 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 FGF7P4-201ENST00000509595 295 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC011406.1-201ENST00000512440 370 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC093303.1-201ENST00000514549 295 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU6-1114P-201ENST00000516022 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 Y_RNA.706-201ENST00000516933 99 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC091144.1-201ENST00000519573 138 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC090821.2-201ENST00000523552 176 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC093027.1-201ENST00000546698 429 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.16□□□□□ -2.22
MRPL3P09001 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.16□□□□□ -2.22
MRPL3P09001 MIR5094-201ENST00000578766 85 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC084781.2-201ENST00000615568 161 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 PISRT1.1-201ENST00000616930 107 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC087588.2-201ENST00000617667 426 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC126177.8-201ENST00000618339 1015 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.16□□□□□ -2.22
MRPL3P09001 MIR8063-201ENST00000621930 81 ntBASIC1.16□□□□□ -2.22
MRPL3P09001 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
MRPL3P09001 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
MRPL3P09001 Y_RNA.287-201ENST00000364853 94 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 Y_RNA.358-201ENST00000365491 99 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 Y_RNA.364-201ENST00000365532 101 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 RNU6-793P-201ENST00000384233 104 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 RNU6-318P-201ENST00000384283 103 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 SNORA75.6-201ENST00000391318 127 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.15□□□□□ -2.23
MRPL3P09001 AL135790.2-201ENST00000437701 267 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 MTATP6P23-201ENST00000440153 476 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 RPL17P19-201ENST00000489069 552 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.15□□□□□ -2.23
MRPL3P09001 YWHAEP4-201ENST00000505390 198 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC022493.2-201ENST00000506122 481 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 AC025465.3-201ENST00000510570 311 ntBASIC1.15□□□□□ -2.23
MRPL3P09001 RNU6-948P-201ENST00000516374 107 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms