Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC091925.1-201ENST00000623204 462 ntBASIC1.96□□□□□ -2.1
GPC4O75487 snoZ196.1-201ENST00000625269 89 ntBASIC1.96□□□□□ -2.1
GPC4O75487 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.96□□□□□ -2.1
GPC4O75487 U3.8-201ENST00000363675 217 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RNU5F-3P-201ENST00000363767 117 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RNU4-42P-201ENST00000364738 142 ntBASIC1.95□□□□□ -2.1
GPC4O75487 Y_RNA.394-201ENST00000383942 103 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RNU6-708P-201ENST00000384217 107 ntBASIC1.95□□□□□ -2.1
GPC4O75487 SNORA48.1-201ENST00000390879 135 ntBASIC1.95□□□□□ -2.1
GPC4O75487 AL512604.1-201ENST00000404812 257 ntBASIC1.95□□□□□ -2.1
GPC4O75487 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
GPC4O75487 MIR1185-2-201ENST00000408687 86 ntBASIC1.95□□□□□ -2.1
GPC4O75487 Y_RNA.595-201ENST00000410403 105 ntBASIC1.95□□□□□ -2.1
GPC4O75487 AL121890.1-201ENST00000435457 205 ntBASIC1.95□□□□□ -2.1
GPC4O75487 UBE2V1P7-201ENST00000446395 340 ntBASIC1.95□□□□□ -2.1
GPC4O75487 ATP5J2P3-201ENST00000451550 258 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RNU6-221P-201ENST00000459541 99 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
GPC4O75487 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.95□□□□□ -2.1
GPC4O75487 AC011406.1-201ENST00000512440 370 ntBASIC1.95□□□□□ -2.1
GPC4O75487 Y_RNA.661-201ENST00000516003 99 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RN7SKP49-201ENST00000516675 260 ntBASIC1.95□□□□□ -2.1
GPC4O75487 RNU7-4P-201ENST00000516961 62 ntBASIC1.95□□□□□ -2.1
GPC4O75487 AC005786.1-201ENST00000588553 154 ntBASIC1.95□□□□□ -2.1
GPC4O75487 AL080274.1-201ENST00000605565 220 ntBASIC1.95□□□□□ -2.1
GPC4O75487 AC006026.1-201ENST00000444025 1803 ntBASIC1.95□□□□□ -2.1
GPC4O75487 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.95□□□□□ -2.1
GPC4O75487 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
GPC4O75487 AP006437.1-201ENST00000641440 3685 ntBASIC1.94□□□□□ -2.1
GPC4O75487 MIR369-201ENST00000362155 70 ntBASIC1.94□□□□□ -2.1
GPC4O75487 Y_RNA.605-201ENST00000410577 105 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AC099799.1-201ENST00000439809 192 ntBASIC1.94□□□□□ -2.1
GPC4O75487 PCNPP5-201ENST00000452246 481 ntBASIC1.94□□□□□ -2.1
GPC4O75487 NDUFB4P10-201ENST00000452541 359 ntBASIC1.94□□□□□ -2.1
GPC4O75487 RNU6-107P-201ENST00000516643 102 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AC025647.1-201ENST00000517879 253 ntBASIC1.94□□□□□ -2.1
GPC4O75487 SUMO2P18-201ENST00000518873 252 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AC144568.1-201ENST00000520139 137 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.94□□□□□ -2.1
GPC4O75487 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.94□□□□□ -2.1
GPC4O75487 MIR4287-201ENST00000579398 78 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
GPC4O75487 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.94□□□□□ -2.1
GPC4O75487 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
GPC4O75487 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
GPC4O75487 Y_RNA.197-201ENST00000364004 102 ntBASIC1.93□□□□□ -2.1
GPC4O75487 Y_RNA.428-201ENST00000384078 102 ntBASIC1.93□□□□□ -2.1
GPC4O75487 SNORA8-201ENST00000384574 139 ntBASIC1.93□□□□□ -2.1
GPC4O75487 RNU6-308P-201ENST00000390957 107 ntBASIC1.93□□□□□ -2.1
GPC4O75487 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
GPC4O75487 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.93□□□□□ -2.1
GPC4O75487 SNORD12B-201ENST00000410433 91 ntBASIC1.93□□□□□ -2.1
GPC4O75487 CEP57L1P1-201ENST00000430943 1201 ntBASIC1.93□□□□□ -2.1
GPC4O75487 UQCRBP2-201ENST00000447827 297 ntBASIC1.93□□□□□ -2.1
GPC4O75487 YWHAEP4-201ENST00000505390 198 ntBASIC1.93□□□□□ -2.1
GPC4O75487 SNORD116.3-201ENST00000517176 78 ntBASIC1.93□□□□□ -2.1
GPC4O75487 AP002001.1-203ENST00000534002 267 ntBASIC1.93□□□□□ -2.1
GPC4O75487 MIR5094-201ENST00000578766 85 ntBASIC1.93□□□□□ -2.1
GPC4O75487 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
GPC4O75487 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.93□□□□□ -2.1
GPC4O75487 MIR338-201ENST00000636369 67 ntBASIC1.93□□□□□ -2.1
GPC4O75487 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
GPC4O75487 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
GPC4O75487 Y_RNA.80-201ENST00000362996 102 ntBASIC1.92□□□□□ -2.1
GPC4O75487 SNORA33-201ENST00000363664 130 ntBASIC1.92□□□□□ -2.1
GPC4O75487 Y_RNA.287-201ENST00000364853 94 ntBASIC1.92□□□□□ -2.1
GPC4O75487 Y_RNA.485-201ENST00000384395 102 ntBASIC1.92□□□□□ -2.1
GPC4O75487 AL158823.1-201ENST00000418441 478 ntBASIC1.92□□□□□ -2.1
GPC4O75487 AC018865.2-201ENST00000423631 129 ntBASIC1.92□□□□□ -2.1
GPC4O75487 AC074290.1-201ENST00000448883 135 ntBASIC1.92□□□□□ -2.1
GPC4O75487 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.92□□□□□ -2.1
GPC4O75487 snoU13.15-201ENST00000459407 104 ntBASIC1.92□□□□□ -2.1
GPC4O75487 HMGB3P17-201ENST00000504195 649 ntBASIC1.92□□□□□ -2.1
GPC4O75487 MIR2355-201ENST00000517199 87 ntBASIC1.92□□□□□ -2.1
GPC4O75487 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.92□□□□□ -2.1
GPC4O75487 AC018448.1-201ENST00000552843 316 ntBASIC1.92□□□□□ -2.1
GPC4O75487 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.92□□□□□ -2.1
GPC4O75487 SUB1P4-201ENST00000566062 339 ntBASIC1.92□□□□□ -2.1
GPC4O75487 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
GPC4O75487 AC092447.9-201ENST00000603395 144 ntBASIC1.92□□□□□ -2.1
GPC4O75487 U2.1-201ENST00000618978 145 ntBASIC1.92□□□□□ -2.1
GPC4O75487 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
GPC4O75487 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.92□□□□□ -2.1
GPC4O75487 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
GPC4O75487 Y_RNA.252-201ENST00000364556 101 ntBASIC1.91□□□□□ -2.1
GPC4O75487 SNORD42.2-201ENST00000365570 69 ntBASIC1.91□□□□□ -2.1
GPC4O75487 RNU6-926P-201ENST00000384075 107 ntBASIC1.91□□□□□ -2.1
GPC4O75487 Y_RNA.535-201ENST00000384612 99 ntBASIC1.91□□□□□ -2.1
GPC4O75487 RNU6-417P-201ENST00000384712 107 ntBASIC1.91□□□□□ -2.1
GPC4O75487 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
GPC4O75487 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
GPC4O75487 RNA5SP489-201ENST00000410986 109 ntBASIC1.91□□□□□ -2.1
GPC4O75487 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
GPC4O75487 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.91□□□□□ -2.1
GPC4O75487 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.91□□□□□ -2.1
GPC4O75487 AL137792.2-201ENST00000443484 235 ntBASIC1.91□□□□□ -2.1
GPC4O75487 SNORA40.9-201ENST00000515895 93 ntBASIC1.91□□□□□ -2.1
GPC4O75487 RNU4-77P-201ENST00000516692 156 ntBASIC1.91□□□□□ -2.1
GPC4O75487 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms