Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 MIR147B-201ENST00000390185 80 ntBASIC3.36□□□□□ -1.87
GSC2O15499 SNORD78.1-201ENST00000390866 65 ntBASIC3.36□□□□□ -1.87
GSC2O15499 RNU6-972P-201ENST00000391208 107 ntBASIC3.36□□□□□ -1.87
GSC2O15499 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.36□□□□□ -1.87
GSC2O15499 YME1L1P1-201ENST00000429435 297 ntBASIC3.36□□□□□ -1.87
GSC2O15499 MTATP6P21-201ENST00000440681 189 ntBASIC3.36□□□□□ -1.87
GSC2O15499 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.36□□□□□ -1.87
GSC2O15499 AC109327.2-201ENST00000448339 378 ntBASIC3.36□□□□□ -1.87
GSC2O15499 RPL27AP5-201ENST00000469428 449 ntBASIC3.36□□□□□ -1.87
GSC2O15499 AC107934.2-201ENST00000518653 310 ntBASIC3.36□□□□□ -1.87
GSC2O15499 AL365205.2-201ENST00000594586 68 ntBASIC3.36□□□□□ -1.87
GSC2O15499 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.36□□□□□ -1.87
GSC2O15499 AL137067.1-201ENST00000615933 120 ntBASIC3.36□□□□□ -1.87
GSC2O15499 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.36□□□□□ -1.87
GSC2O15499 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
GSC2O15499 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
GSC2O15499 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.35□□□□□ -1.87
GSC2O15499 Y_RNA.323-201ENST00000365157 109 ntBASIC3.35□□□□□ -1.87
GSC2O15499 SNORD6-201ENST00000365444 73 ntBASIC3.35□□□□□ -1.87
GSC2O15499 MIR450A2-201ENST00000385022 100 ntBASIC3.35□□□□□ -1.87
GSC2O15499 MIR181B1-201ENST00000385240 110 ntBASIC3.35□□□□□ -1.87
GSC2O15499 RNA5SP354-201ENST00000391247 136 ntBASIC3.35□□□□□ -1.87
GSC2O15499 RPL21P3-201ENST00000395517 478 ntBASIC3.35□□□□□ -1.87
GSC2O15499 SNORA3.3-201ENST00000408712 125 ntBASIC3.35□□□□□ -1.87
GSC2O15499 AC007064.1-201ENST00000412238 351 ntBASIC3.35□□□□□ -1.87
GSC2O15499 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
GSC2O15499 RPS3AP1-201ENST00000413190 320 ntBASIC3.35□□□□□ -1.87
GSC2O15499 RPS4XP11-201ENST00000446897 772 ntBASIC3.35□□□□□ -1.87
GSC2O15499 RNA5SP310-201ENST00000459084 116 ntBASIC3.35□□□□□ -1.87
GSC2O15499 AC092185.1-201ENST00000491371 97 ntBASIC3.35□□□□□ -1.87
GSC2O15499 AC010598.1-201ENST00000510378 103 ntBASIC3.35□□□□□ -1.87
GSC2O15499 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.35□□□□□ -1.87
GSC2O15499 Y_RNA.685-201ENST00000516532 108 ntBASIC3.35□□□□□ -1.87
GSC2O15499 AC141557.1-201ENST00000540982 400 ntBASIC3.35□□□□□ -1.87
GSC2O15499 RNU1-30P-201ENST00000606575 163 ntBASIC3.35□□□□□ -1.87
GSC2O15499 AC096577.2-201ENST00000611455 153 ntBASIC3.35□□□□□ -1.87
GSC2O15499 MALAT1.1-201ENST00000618249 95 ntBASIC3.35□□□□□ -1.87
GSC2O15499 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.35□□□□□ -1.87
GSC2O15499 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.35□□□□□ -1.87
GSC2O15499 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.35□□□□□ -1.87
GSC2O15499 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
GSC2O15499 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GSC2O15499 AL159152.1-201ENST00000635019 2587 ntBASIC3.35□□□□□ -1.87
GSC2O15499 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
GSC2O15499 AL589743.1-201ENST00000551932 2712 ntBASIC3.35□□□□□ -1.87
GSC2O15499 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.34□□□□□ -1.87
GSC2O15499 Y_RNA.111-201ENST00000363248 100 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU6-117P-201ENST00000365415 107 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU6-1279P-201ENST00000383917 103 ntBASIC3.34□□□□□ -1.87
GSC2O15499 MIR607-201ENST00000385241 96 ntBASIC3.34□□□□□ -1.87
GSC2O15499 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
GSC2O15499 AL117342.1-201ENST00000404861 406 ntBASIC3.34□□□□□ -1.87
GSC2O15499 MIR1283-1-201ENST00000408494 87 ntBASIC3.34□□□□□ -1.87
GSC2O15499 AC008134.1-201ENST00000420943 193 ntBASIC3.34□□□□□ -1.87
GSC2O15499 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.34□□□□□ -1.87
GSC2O15499 AC245102.2-201ENST00000448956 180 ntBASIC3.34□□□□□ -1.87
GSC2O15499 AC023449.1-201ENST00000454464 154 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU7-14P-201ENST00000459331 62 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
GSC2O15499 AC011406.1-201ENST00000512440 370 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU6-1146P-201ENST00000516282 102 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU6-1270P-201ENST00000517128 108 ntBASIC3.34□□□□□ -1.87
GSC2O15499 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.34□□□□□ -1.87
GSC2O15499 MIR3117-201ENST00000584034 78 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU6-94P-201ENST00000607728 107 ntBASIC3.34□□□□□ -1.87
GSC2O15499 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
GSC2O15499 MIR6716-201ENST00000613413 80 ntBASIC3.34□□□□□ -1.87
GSC2O15499 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
GSC2O15499 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
GSC2O15499 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
GSC2O15499 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
GSC2O15499 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
GSC2O15499 Y_RNA.49-201ENST00000362714 112 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RNU6-1134P-201ENST00000365156 101 ntBASIC3.33□□□□□ -1.88
GSC2O15499 Y_RNA.362-201ENST00000365518 110 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RNU6-1113P-201ENST00000384348 107 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RNU1-57P-201ENST00000384491 166 ntBASIC3.33□□□□□ -1.88
GSC2O15499 SNORA70C-201ENST00000384538 135 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RNA5SP136-201ENST00000410906 107 ntBASIC3.33□□□□□ -1.88
GSC2O15499 COX6CP6-201ENST00000490840 228 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RNU6-240P-201ENST00000516098 97 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RNU6-1149P-201ENST00000516810 97 ntBASIC3.33□□□□□ -1.88
GSC2O15499 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.33□□□□□ -1.88
GSC2O15499 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.33□□□□□ -1.88
GSC2O15499 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
GSC2O15499 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.33□□□□□ -1.88
GSC2O15499 AC012493.2-201ENST00000595083 291 ntBASIC3.33□□□□□ -1.88
GSC2O15499 SNORD115-40-201ENST00000606510 82 ntBASIC3.33□□□□□ -1.88
GSC2O15499 AC134878.1-201ENST00000619901 243 ntBASIC3.33□□□□□ -1.88
GSC2O15499 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.33□□□□□ -1.88
GSC2O15499 MIR6830-201ENST00000636015 70 ntBASIC3.33□□□□□ -1.88
GSC2O15499 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GSC2O15499 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.33□□□□□ -1.88
GSC2O15499 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
GSC2O15499 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
GSC2O15499 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.32□□□□□ -1.88
GSC2O15499 SNORA62-201ENST00000365493 153 ntBASIC3.32□□□□□ -1.88
GSC2O15499 RNU6-1152P-201ENST00000384576 107 ntBASIC3.32□□□□□ -1.88
GSC2O15499 MIR562-201ENST00000384894 95 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms