Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AC004486.1-201ENST00000546846 233 ntBASIC4.16□□□□□ -1.74
RCCD1A6NED2 AC007229.1-201ENST00000590455 412 ntBASIC4.16□□□□□ -1.74
RCCD1A6NED2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RCCD1A6NED2 AC080128.1-201ENST00000474389 1917 ntBASIC4.16□□□□□ -1.74
RCCD1A6NED2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RCCD1A6NED2 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RCCD1A6NED2 ZNF271P-202ENST00000465539 1970 ntBASIC4.16□□□□□ -1.74
RCCD1A6NED2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RCCD1A6NED2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
RCCD1A6NED2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RCCD1A6NED2 MIR302B-201ENST00000362188 73 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 SNORA2.2-201ENST00000365473 135 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 RNU6-546P-201ENST00000383991 107 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RCCD1A6NED2 RNU6-1077P-201ENST00000410506 102 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 AC123900.1-201ENST00000420390 96 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 RNA5SP208-201ENST00000516156 78 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 RNU6-1291P-201ENST00000516591 104 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 AL358944.1-201ENST00000528537 144 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.15□□□□□ -1.75
RCCD1A6NED2 AC021443.1-201ENST00000604478 211 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 AL359075.3-201ENST00000613288 217 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 MIR6716-201ENST00000613413 80 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 MIR8059-201ENST00000620427 81 ntBASIC4.15□□□□□ -1.75
RCCD1A6NED2 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.15□□□□□ -1.75
RCCD1A6NED2 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RCCD1A6NED2 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.15□□□□□ -1.75
RCCD1A6NED2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
RCCD1A6NED2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RCCD1A6NED2 MIR126-201ENST00000362291 85 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 Y_RNA.93-201ENST00000363066 109 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 AC009969.1-201ENST00000438726 172 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 SNRPGP3-201ENST00000469405 227 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 RNA5SP309-201ENST00000516670 106 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 TOMM20P2-201ENST00000540082 421 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 MIR3138-201ENST00000585238 82 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 AC091167.4-201ENST00000605079 184 ntBASIC4.14□□□□□ -1.75
RCCD1A6NED2 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RCCD1A6NED2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RCCD1A6NED2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RCCD1A6NED2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCCD1A6NED2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCCD1A6NED2 RNU6-349P-201ENST00000362402 107 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 Y_RNA.298-201ENST00000364960 107 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 RNU6-1189P-201ENST00000383958 107 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 RNU6-1152P-201ENST00000384576 107 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 MIR802-201ENST00000390235 94 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.13□□□□□ -1.75
RCCD1A6NED2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
RCCD1A6NED2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC4.13□□□□□ -1.75
RCCD1A6NED2 AC093259.1-201ENST00000509755 300 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 SCARNA17.1-201ENST00000516211 143 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 SCARNA17.2-201ENST00000516334 143 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 RNU7-70P-201ENST00000516941 66 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 RNA5SP179-201ENST00000517284 121 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.13□□□□□ -1.75
RCCD1A6NED2 SCARNA17.4-201ENST00000614296 143 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RCCD1A6NED2 ZNF720P1-201ENST00000562403 1939 ntBASIC4.13□□□□□ -1.75
RCCD1A6NED2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
RCCD1A6NED2 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.12□□□□□ -1.75
RCCD1A6NED2 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 Y_RNA.344-201ENST00000365381 112 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 U8.17-201ENST00000391292 132 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC060773.1-201ENST00000421698 310 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC009414.1-201ENST00000427200 443 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC107297.1-201ENST00000459991 176 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 RN7SKP209-201ENST00000516888 304 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 RNU6-341P-201ENST00000516973 96 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 SUMO2P16-201ENST00000519475 264 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC074050.1-201ENST00000563247 211 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 MIR3939-201ENST00000582614 106 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.12□□□□□ -1.75
RCCD1A6NED2 AC244205.2-202ENST00000635781 342 ntBASIC4.12□□□□□ -1.75
RCCD1A6NED2 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RCCD1A6NED2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RCCD1A6NED2 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.11□□□□□ -1.75
RCCD1A6NED2 SNORA63D-201ENST00000364359 132 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 Y_RNA.265-201ENST00000364677 108 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 Y_RNA.332-201ENST00000365271 113 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 MIR548D2-201ENST00000384955 97 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 MT-TI-201ENST00000387365 69 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 MIR1183-201ENST00000408856 89 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 RNU6-592P-201ENST00000411333 103 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 FTH1P12-201ENST00000432137 551 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 AC244505.4-201ENST00000434905 287 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 SSXP5-201ENST00000443473 287 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 AC109327.2-201ENST00000448339 378 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 AC106707.2-201ENST00000484182 374 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 PHBP14-201ENST00000512887 367 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 SCARNA11.3-201ENST00000517276 130 ntBASIC4.11□□□□□ -1.75
RCCD1A6NED2 AP003730.1-201ENST00000524605 285 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms