Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC189A1A4V9 MIR8063-201ENST00000621930 81 ntBASIC1.94□□□□□ -2.1
CCDC189A1A4V9 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.94□□□□□ -2.1
CCDC189A1A4V9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC189A1A4V9 MIR302D-201ENST00000362275 68 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RNU6-876P-201ENST00000391295 104 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 AC019129.1-201ENST00000403786 261 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RNU2-2P-201ENST00000410396 191 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RPL23AP50-201ENST00000434149 455 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 UQCRBP2-201ENST00000447827 297 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RNU7-87P-201ENST00000459343 62 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RPS26P55-201ENST00000471178 356 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RPL17P19-201ENST00000489069 552 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC189A1A4V9 AC079140.2-201ENST00000506193 142 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RNU6-902P-201ENST00000517212 91 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC189A1A4V9 MIR3945-201ENST00000581853 98 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 AC104260.1-201ENST00000616660 539 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC1.93□□□□□ -2.1
CCDC189A1A4V9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CCDC189A1A4V9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.93□□□□□ -2.1
CCDC189A1A4V9 RNU6-271P-201ENST00000363858 105 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 MIR329-1-201ENST00000385028 80 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 MT-TL1-201ENST00000386347 75 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 SNORA75.4-201ENST00000391278 119 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 MTCYBP4-201ENST00000401524 249 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 RN7SKP200-201ENST00000410564 320 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 DPH3P2-201ENST00000422618 250 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 OOSP1P1-201ENST00000423265 274 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CCDC189A1A4V9 RPL7P42-201ENST00000481005 679 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.92□□□□□ -2.1
CCDC189A1A4V9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.92□□□□□ -2.1
CCDC189A1A4V9 AC091144.1-201ENST00000519573 138 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC189A1A4V9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.92□□□□□ -2.1
CCDC189A1A4V9 AC092794.2-201ENST00000620933 563 ntBASIC1.92□□□□□ -2.1
CCDC189A1A4V9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CCDC189A1A4V9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 Y_RNA.473-201ENST00000384333 102 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 RPL21P1-201ENST00000399532 476 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 RNU6-1001P-201ENST00000411265 100 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 AL353997.1-201ENST00000432936 108 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.91□□□□□ -2.1
CCDC189A1A4V9 AC015688.6-201ENST00000577737 104 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 AC125232.2-201ENST00000592457 143 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 AC022306.2-201ENST00000617563 647 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 U6.108-201ENST00000637764 58 ntBASIC1.91□□□□□ -2.1
CCDC189A1A4V9 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.9□□□□□ -2.11
CCDC189A1A4V9 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 SNORD1A-201ENST00000364968 72 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 RNU6-1145P-201ENST00000384246 107 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 MIR194-1-201ENST00000384892 85 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 RNU6-1186P-201ENST00000410429 97 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 RN7SKP223-201ENST00000410582 62 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AC004965.1-201ENST00000413033 213 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC189A1A4V9 SNORD65B-201ENST00000459126 73 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 RN7SKP49-201ENST00000516675 260 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AC091544.4-201ENST00000555268 342 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AC104984.5-201ENST00000586878 94 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AL162424.1-201ENST00000602325 221 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AL121890.5-201ENST00000620848 304 ntBASIC1.9□□□□□ -2.11
CCDC189A1A4V9 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC189A1A4V9 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC189A1A4V9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
CCDC189A1A4V9 RNU6-879P-201ENST00000364328 108 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 SNORA4.2-201ENST00000365313 147 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 Y_RNA.557-201ENST00000384680 107 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 RNA5SP109-201ENST00000391010 116 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 AC092423.1-201ENST00000430165 186 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 AC027119.1-201ENST00000440877 241 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 MRPS10P1-201ENST00000448483 130 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC189A1A4V9 FRG2DP-202ENST00000566967 323 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 MIR4438-201ENST00000585271 93 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 AC025253.1-201ENST00000613623 543 ntBASIC1.89□□□□□ -2.11
CCDC189A1A4V9 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC189A1A4V9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC189A1A4V9 Y_RNA.404-201ENST00000383978 102 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 RNU6-203P-201ENST00000384038 104 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 RNU6-331P-201ENST00000384724 107 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 MIR562-201ENST00000384894 95 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 MRPL42P3-201ENST00000401492 326 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC189A1A4V9 AC010154.1-201ENST00000425857 269 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC189A1A4V9 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC189A1A4V9 RPS27P1-201ENST00000450552 247 ntBASIC1.88□□□□□ -2.11
CCDC189A1A4V9 PCNPP5-201ENST00000452246 481 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms