Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC245047.8-201ENST00000456455 284 ntBASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.94□□□□□ -1.78
RTCBQ9Y3I0 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.71-201ENST00000362892 104 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.218-201ENST00000364218 104 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 MIR548B-201ENST00000385247 97 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 SNORD67-201ENST00000390833 111 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 AC006461.1-201ENST00000412637 326 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 AL121914.1-201ENST00000450188 156 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 RNU6-1333P-201ENST00000516162 93 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 MIR4738-201ENST00000579134 87 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 RPL17P51-201ENST00000605218 238 ntBASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
RTCBQ9Y3I0 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 Y_RNA.172-201ENST00000363765 102 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 SNORD116-14-201ENST00000383894 92 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 SNORD116-17-201ENST00000383929 92 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 RNU6-144P-201ENST00000383951 107 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 SNORD116-15-201ENST00000384445 92 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 SNORA20-201ENST00000384662 132 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 SNORD116-19-201ENST00000384729 92 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 Z98941.1-201ENST00000407764 100 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 AC105272.1-201ENST00000438604 198 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 AC112771.1-201ENST00000463581 102 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 RN7SKP132-201ENST00000516001 208 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 AC112693.2-201ENST00000556538 232 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 MIR4319-201ENST00000577285 85 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 AC104984.5-201ENST00000586878 94 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 AC025754.2-201ENST00000606491 432 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 AC099778.2-201ENST00000610904 211 ntBASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
RTCBQ9Y3I0 RNU6-215P-201ENST00000365169 102 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 AP002088.1-201ENST00000382740 395 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 RNA5SP184-201ENST00000411071 108 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 RPL23AP58-201ENST00000440453 469 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 RNU6-1211P-201ENST00000459179 105 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 AC114982.1-201ENST00000469402 321 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 MIR4724-201ENST00000579485 89 ntBASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.91□□□□□ -1.78
RTCBQ9Y3I0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTCBQ9Y3I0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RTCBQ9Y3I0 RNU6-1305P-201ENST00000364353 104 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 Y_RNA.420-201ENST00000384043 110 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 Y_RNA.542-201ENST00000384641 111 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 RNU6-1228P-201ENST00000391014 107 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 SNORD37.2-201ENST00000391075 66 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 AC002075.2-201ENST00000425207 252 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 RPL36AP48-201ENST00000485521 314 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 AC083906.5-201ENST00000503722 328 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 AC079598.5-201ENST00000547460 117 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 TUG1_4.1-201ENST00000619464 181 ntBASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RTCBQ9Y3I0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 Y_RNA.229-201ENST00000364347 113 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 RNU6-643P-201ENST00000384018 107 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 MIR586-201ENST00000385035 97 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 MIR15B-201ENST00000385045 98 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 SNORA12-201ENST00000391162 147 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 RHEBP3-201ENST00000411920 351 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 uc_338.14-201ENST00000613162 166 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 MIR6715A-201ENST00000615929 79 ntBASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.89□□□□□ -1.79
RTCBQ9Y3I0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 MIR367-201ENST00000362299 68 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 SNORD114-7-201ENST00000362520 77 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 RNA5SP295-201ENST00000362655 121 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 MT-TT-201ENST00000387460 66 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 AL139095.1-201ENST00000404326 391 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 AL606845.1-201ENST00000404881 255 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 RNA5SP38-201ENST00000410750 119 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 AC108938.1-201ENST00000451204 136 ntBASIC3.88□□□□□ -1.79
RTCBQ9Y3I0 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms