Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC008737.2-201ENST00000599446 118 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 AL390123.1-201ENST00000603216 237 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 AC010999.1-201ENST00000611856 324 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CDK11AQ9UQ88 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
CDK11AQ9UQ88 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 RNU1-76P-201ENST00000362903 159 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.152-201ENST00000363578 100 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 RNU6-26P-201ENST00000383985 107 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 AL023284.1-201ENST00000403956 276 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 NDUFA5P6-201ENST00000542110 379 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 AC007229.1-201ENST00000590455 412 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 AL031274.2-201ENST00000599419 203 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 AC005034.5-201ENST00000604219 466 ntBASIC3.4□□□□□ -1.87
CDK11AQ9UQ88 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 RNU1-62P-201ENST00000362599 164 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.179-201ENST00000363844 90 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 SNORA48.3-201ENST00000391081 134 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 snosnR66.1-201ENST00000391095 99 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 RN7SKP49-201ENST00000516675 260 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 RNU2-44P-201ENST00000516795 194 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 RNU6-1137P-201ENST00000517073 99 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 RNU6-548P-201ENST00000517083 115 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 MIR5006-201ENST00000583027 110 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 AL353997.5-201ENST00000618886 171 ntBASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.39□□□□□ -1.87
CDK11AQ9UQ88 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AL356292.1-201ENST00000283110 373 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 RNA5SP99-201ENST00000364020 114 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 RNU6-944P-201ENST00000364023 107 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.551-201ENST00000384661 102 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 SNORD78.2-201ENST00000391076 69 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AL355497.1-201ENST00000406262 551 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.595-201ENST00000410403 105 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 SDAD1P3-201ENST00000427380 333 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AL445305.1-201ENST00000432577 575 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AC004386.2-201ENST00000441858 148 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 IPO7P1-201ENST00000442031 636 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 RPS23P5-201ENST00000495419 428 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 AC125232.2-201ENST00000592457 143 ntBASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CDK11AQ9UQ88 SNORA18.2-201ENST00000383865 132 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 RNU6-546P-201ENST00000383991 107 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 RNU6-793P-201ENST00000384233 104 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 U8.13-201ENST00000390842 128 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 SNORA40.19-201ENST00000390846 128 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 MIR1252-201ENST00000408861 65 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 AC113618.1-201ENST00000416747 285 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 AL445646.1-201ENST00000431784 216 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 AC009237.7-201ENST00000447357 229 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 MTND5P22-201ENST00000458380 195 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.683-201ENST00000516508 93 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 RNU5F-4P-201ENST00000516581 114 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.713-201ENST00000517013 96 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.715-201ENST00000517082 110 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 AC113195.1-201ENST00000579952 141 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 AL121655.1-201ENST00000605811 308 ntBASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDK11AQ9UQ88 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU6-450P-201ENST00000364654 107 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 Y_RNA.459-201ENST00000384251 102 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 MIR549A-201ENST00000385268 96 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU2-32P-201ENST00000411193 191 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU6-1001P-201ENST00000411265 100 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 FCF1P4-201ENST00000448326 183 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 AC055731.1-201ENST00000474387 401 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 SNORA31.11-201ENST00000516528 139 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU6-344P-201ENST00000516635 111 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU6-667P-201ENST00000517186 102 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU2-19P-201ENST00000517288 84 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 AC136443.5-201ENST00000603741 370 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 AL355297.3-201ENST00000604082 446 ntBASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.36□□□□□ -1.87
CDK11AQ9UQ88 RNU6-1145P-201ENST00000384246 107 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 MIR329-1-201ENST00000385028 80 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 SNORA26.9-201ENST00000391322 122 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 AC007395.1-201ENST00000451333 677 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 U8.20-201ENST00000459445 131 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 AC022616.8-201ENST00000533569 253 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 SNORD11B-201ENST00000607707 90 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 AC080100.1-201ENST00000624239 5356 ntBASIC3.35□□□□□ -1.87
CDK11AQ9UQ88 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.87
CDK11AQ9UQ88 MTND5P35-201ENST00000557537 1720 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms